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Name : Ping_0098 (Ping_0098) Accession : YP_941571.1 Strain : Psychromonas ingrahamii 37 Genome accession: NC_008709 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 131375 - 132910 bp Length : 1536 bp Strand : + Note : KEGG: sfr:Sfri_0106 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase DNA sequence : ATGATCACGCCTGAGCAAGATACTTTGCAGGTGGTGGCGGCGCTCAATGAAGCTGAGCTTATTGAAGTCACGCCGGGTGG TCAGTTACCTTTCCCATTTTCAAAAAAACATGAGTTAGTGATTTTTTACGAAAATGAGAATGCACAGCTTTGTTACAAGA AAGCCCCGAGTGCTGATTTGATACTTGAAGTGCGTCGTGCGATCGGTTGTGAATTTACTTTAAAACAGGTAGATAATGTC CTTTTCGAGCAGTTAGTAACAACGGCTTATCAAACTTCTTCTTCTCAAGCACAACAATTGATGGAAGATATTGGCAGTGA TGATCTTTTTACTCTGGTAGATGAATTGCCTCTGGATGAGGATTTATTAGAAACACAAGATGATGCCCCGATTATTAAAT TAATTAATGCTATGTTGGGTGAGGCTATTAAAGAAGAAGCTTCCGATATTCATATCGAAACCTTTGAAAATAGTTTAGTT ATTCGCTTCCGTATTGATGGTTTATTACGAGAAATTCTTAAACCACAACGTAAGTTGTCTAACTTATTGGTTTCTCGTAT TAAAGTAATGGCGAAGTTAGATATTGCTGAAAAGCGGGTGCCACAGGATGGCCGTATTTCCGTACGTATTGGTGGTCGGG CGGTTGATGTGCGTGTTTCAACTATGCCTTCAAGTCATGGTGAGCGAGTTGTACTGCGTTTATTGGATAAGAATGTCATT AAATTAGACCTTGCAACCTTAGGTATGACAGAAGAAAATCACCAACTGGTGCGCGACCTTATTCATAAACCCCATGGCAT TATTTTGGTCACAGGACCAACAGGTTCAGGTAAAAGTACGACCTTGTATGCCAGTTTATTAGAGATAAACTCGAAAGATC GTAATATCCTCACGGTTGAAGATCCTATTGAGTATGCCATTGATGGTGTCGGACAAACTCAGGTAAATACCAAAGTGGAC ATGACTTTTGCGCGGGGATTACGGGCAATTTTACGTCAGGATCCCGATGTTGTTATGATTGGTGAGATTCGTGATTTAGA AACCGCGCAGATTGCCGTACAAGCCAGTTTAACCGGACATCTGGTTTTATCAACCCTGCACACTAACAGTGCTGTGGGTG CGGTGACTCGTTTGCATGATATGGGAGTTGAGCCGTTTCTGTTATCTTCCAGTTTATTAGGGGTTTTAGCGCAACGATTA GTCAGGCGTTTATGCCCTGAATGTAGACAAACGCACACCACAACAGCACAAGAAAAGCAGATTTTAGGTTTGCAGGAAAA AGATAATGCGCGTATCTATAAAGCCAAAGGTTGCTCTCAATGCAATCAAACCGGCTATAGAGGGCGTACCGGTATCCATG AGTTATTAATCGTTGATGAGCAGGTTCGCGAATTAATTCATTCCGGAGCAGGAGAGCAGGCGGTCGAAAAATTAATTCGT CAGCGTACGCCCAGTATTCGCGATGATGGTCTAGCTAAAGTGTTAGCAGGAGTAACCACATTGGAAGAGGTTCTACGTGT AAGCAGAGAGGATTAA Protein sequence : MITPEQDTLQVVAALNEAELIEVTPGGQLPFPFSKKHELVIFYENENAQLCYKKAPSADLILEVRRAIGCEFTLKQVDNV LFEQLVTTAYQTSSSQAQQLMEDIGSDDLFTLVDELPLDEDLLETQDDAPIIKLINAMLGEAIKEEASDIHIETFENSLV IRFRIDGLLREILKPQRKLSNLLVSRIKVMAKLDIAEKRVPQDGRISVRIGGRAVDVRVSTMPSSHGERVVLRLLDKNVI KLDLATLGMTEENHQLVRDLIHKPHGIILVTGPTGSGKSTTLYASLLEINSKDRNILTVEDPIEYAIDGVGQTQVNTKVD MTFARGLRAILRQDPDVVMIGEIRDLETAQIAVQASLTGHLVLSTLHTNSAVGAVTRLHDMGVEPFLLSSSLLGVLAQRL VRRLCPECRQTHTTTAQEKQILGLQEKDNARIYKAKGCSQCNQTGYRGRTGIHELLIVDEQVRELIHSGAGEQAVEKLIR QRTPSIRDDGLAKVLAGVTTLEEVLRVSRED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-144 | 65 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 8e-145 | 65 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Ping_0098 | YP_941571.1 | general secretory pathway protein E | VFG2048 | Protein | 1e-144 | 65 |
| Ping_0098 | YP_941571.1 | general secretory pathway protein E | VFG0182 | Protein | 1e-136 | 62 |
| Ping_0098 | YP_941571.1 | general secretory pathway protein E | VFG1876 | Protein | 1e-129 | 59 |
| Ping_0098 | YP_941571.1 | general secretory pathway protein E | VFG2426 | Protein | 2e-80 | 48 |
