Gene Information

Name : Ping_0997 (Ping_0997)
Accession : YP_942435.1
Strain : Psychromonas ingrahamii 37
Genome accession: NC_008709
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 1253986 - 1254942 bp
Length : 957 bp
Strand : +
Note : PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: son:SO3386 hypothetical protein

DNA sequence :
ATGGTTGAGTTTTCAGATGAAAAAATTCAAGTTGGCATAAGCAGTTGCTTAATTGGCAACAAAGTCCGTTTTGATGGCGG
GCATAAGCAGAGTTCATATTGCACTAAAGTCTTATCCGATTATTTTGATTTTCAGCCTATCTGTCCGGAAATGGCCATTG
GATTAGGGACACCTCGAAAAGCGATTCGCTTGGTTAAAGATGAAGACAGGATCCGTGTTATGGCTAGTGATGGTAGTTTT
GAAGTCACTGAACAATTAACTGAATTCGGCGAAAAAACCAGCCCTTTATTAACCTCATTGAGCGGTTATATATTCTGTGC
TAAATCGCCCACTTGCGGTATGGAACGGGTAACTCTTTATAATGAGGGCACTAATCAGGGTAATCGTGACGGAGTCGGCG
TGTTTGCTGCAAAGGTGATGGCGGATCATCCTCTGCTGCCAGTAGAAGAACAGGGTCGTTTAAATGATCTGTTATTAAGG
GAAAATTTTATCACTCGCGTTTTTGCTTACCATAGGTGGCAATCATTAGTCGCAGGCGGTTTAAGTATTCGCAAACTTAT
TCAGTTTCATGCCGAGCATAAATACTTATTAATGTCCCATAATGTCAAACTTTATTATAAATTAGGCCCACTATTAAGTG
GTAGCAAAGAAGCCATTGAGGTGGTTGCTAAGCAGTACATTGAGGGGTTTATGGCGACCCTTAAAACCTTACCTAATCGT
AAAAGTCACACTAATACGCTATCGCATCTGCAAGGCTATTTTAAGCGTTCACTCAGCAGTGCCGAGCGTGTGGATTTGGC
AAATGACATTGATAAATACCGCAAAGGTTTGTTACCGCTAATGGTCCCGATAACGTTAATTACGCATTATCTTACTTTAT
ATCCCGATCCTTATTTAAAGCAGCAGGTCTATCTGCACCCTCATCCGGAAGAACTAAAACTACGCTATTCGCATTAA

Protein sequence :
MVEFSDEKIQVGISSCLIGNKVRFDGGHKQSSYCTKVLSDYFDFQPICPEMAIGLGTPRKAIRLVKDEDRIRVMASDGSF
EVTEQLTEFGEKTSPLLTSLSGYIFCAKSPTCGMERVTLYNEGTNQGNRDGVGVFAAKVMADHPLLPVEEQGRLNDLLLR
ENFITRVFAYHRWQSLVAGGLSIRKLIQFHAEHKYLLMSHNVKLYYKLGPLLSGSKEAIEVVAKQYIEGFMATLKTLPNR
KSHTNTLSHLQGYFKRSLSSAERVDLANDIDKYRKGLLPLMVPITLITHYLTLYPDPYLKQQVYLHPHPEELKLRYSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 2e-66 45
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 2e-66 45
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 2e-66 45
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 7e-67 45
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 1e-66 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ping_0997 YP_942435.1 hypothetical protein VFG0490 Protein 7e-67 45