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Name : lysS (Mkms_4844) Accession : YP_940824.1 Strain : Mycobacterium sp. KMS Genome accession: NC_008705 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 5072720 - 5074258 bp Length : 1539 bp Strand : - Note : class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA DNA sequence : GTGACACCGACCGGCGGCGACAACACGCCCGAGAACAACGCGCCCGATAACGACCCTGACATCCCCGAGCAGTTCCGCAT TCGTCAGGCCAAGCGGGAACGTCTGCTGGCCGAGGGTCGCGACCCCTACCCGGTGGACGTGGACCGCACGCACACGCTCG CCGAAGTGCGCGCCGCTTTCCCCGACCTGCCGGTCGACTCGCAGACCGGCGAGATCGTCGGCGTCGCCGGGCGCGTCGTA TTCGCCCGCAACTCGGGGAAGCTGTGTTTCGCGACCTTGCAGGAGGGCGACGGTACGCAACTACAGGCCATGATCAGCCT GGCCGAGGTGGGGCAGGAATCGCTCGACAGCTGGAAAGCCGACGTCGACCTGGGTGACATCGTGTCCGTCCACGGCCAGG TCATCAGTTCCCGTCGCGGTGAGCTCTCTGTGCTCGCCGATTCCTGGCAAATCATCTCCAAGGCGCTGCGGCCGCTTCCG GTCGCGCACAAGGAGATGAGCGAGGAGGCACGGGTGCGGCAGCGCTACGTCGACCTCATCGTGCGTCCGGAGGCCCGCAC CATCGCACGTCAACGCGTGGCCGTCGTGCGTGCGCTCCGCAACGCGCTCGAGCGGCGCGGCTTCCTCGAACTCGAGACGC CGATGCTGCAGACCCTGGCCGGCGGTGCGGCGGCCAGGCCGTTCGTCACCCACTCCAATGCACTCGATGTGGACCTATAC CTGCGTATCGCGCCGGAGCTGTTCCTCAAGCGTGCCCTGGTCGGTGGTTTCGAGAAGGTCTTCGAGCTGAATCGCAACTT CCGAAACGAAGGTATCGATTCCACGCATTCTCCCGAATTCGCGATGCTGGAGACTTATCAGGCGTATGGCGACTACAACG ATTCCGCGGTCGTGACGCGGGAACTAATTCAGGAAGTCGCCGACGAGGCGATCGGGACCCGTCAAGTGCCATTGGCGGAT GGCACCGTGTACGACCTGGACGGTGAGTGGGAGTCGTTGGAAATGTACCCCTCGCTGTCCGCGGCGCTGGGTGAGGAGAT CACCCCGCAGACCCCCGCCGACGAACTCTGGCGGATCGCCGACCGGCTCGGTGTGGAGATTCCCCGTGACCGCGGATACG GCCACGGGAAATTGATCGAGGAACTGTGGGAGCACACCGTCGGCGAGGATCTCTGGGCGCCGACCTTCGTGCGGGACTTC CCGGTGGAGACGACCCCGCTCACCCGGTCGCACCGCAGCGTTCCCGGCGTCACCGAGAAGTGGGATCTCTATGTCCGCAA GTTCGAGTTGGCGACCGGCTATTCCGAACTCATCGATCCGATAATTCAGCGCGAGCGATTCGAGGAGCAGGCGCGAGCGG CCGCTGCCGGTGACGACGAGGCAATGGTTCTCGACGAGGATTTCCTGGCGGCATTGGAGTACGGCATGCCGCCGTCCACC GGTACCGGAATGGGCATCGACCGGTTGCTGATGGCGCTGACTGGACTGTCAATTAGAGAGACAATTCTCTTCCCGATTGT TCGGCGGCACGGCGGCTGA Protein sequence : MTPTGGDNTPENNAPDNDPDIPEQFRIRQAKRERLLAEGRDPYPVDVDRTHTLAEVRAAFPDLPVDSQTGEIVGVAGRVV FARNSGKLCFATLQEGDGTQLQAMISLAEVGQESLDSWKADVDLGDIVSVHGQVISSRRGELSVLADSWQIISKALRPLP VAHKEMSEEARVRQRYVDLIVRPEARTIARQRVAVVRALRNALERRGFLELETPMLQTLAGGAAARPFVTHSNALDVDLY LRIAPELFLKRALVGGFEKVFELNRNFRNEGIDSTHSPEFAMLETYQAYGDYNDSAVVTRELIQEVADEAIGTRQVPLAD GTVYDLDGEWESLEMYPSLSAALGEEITPQTPADELWRIADRLGVEIPRDRGYGHGKLIEELWEHTVGEDLWAPTFVRDF PVETTPLTRSHRSVPGVTEKWDLYVRKFELATGYSELIDPIIQRERFEEQARAAAAGDDEAMVLDEDFLAALEYGMPPST GTGMGIDRLLMALTGLSIRETILFPIVRRHGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 1e-145 | 64 |
