|
Name : Mkms_4381 (Mkms_4381) Accession : YP_940362.1 Strain : Mycobacterium sp. KMS Genome accession: NC_008705 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2826 EC number : - Position : 4600536 - 4602113 bp Length : 1578 bp Strand : + Note : PFAM: Integrase, catalytic region; KEGG: mmc:Mmcs_4037 integrase, catalytic region DNA sequence : TTGAGAGGTTGCGGCGACCGTGTCGTTTCGGAGGACTGTGTCCGGTTTGGGGATCGGCTAGCGCGTTTGTTTAAGGCCGG GGTGCCGGTGAAGGAGGCGGCGGTCGCTACTGGGGTTTCGCGTGACCGGTGTTATGCGATTCTGCGGGCGATCGGCCGGC CTGTCGGGCAGGCCCGTGGTCGGGGTGAGCGCGCTGATCAGCGTGGGGTGGCCGACCTGGGTGTGGTCGTGGCCGTATTC AAGGACACCGGTTCGATCCTGCAGGCGGCCACAGCGTGTGGGGTGTCGCATTCGACGGCACGCAAACTGTTGGTCGCCGA GGGGCTGGTGACCAGCGGGAAGATCCCGTGGGGCAAGCCCGAGGCGAAACGTCGGTGCTTGGAGCTGTTCGAGCAGGGTT GGTCCACCGGGGCAGCGGCGCGGGAGGTCGGTGTCAACGTGCGGACCGCGCGGGACTGGCGCAAGGGGATCCGGCACACC AACAACACGCGGGTTCACCCCGATGGTCGGGTCGTGGACTACACCGACCAGACCGTCTACAAACAGTCGGTGAGCAACCT GATCTGCGATGACACCGGACGGCCGGCCATCGATGACCGGTATCTGTCGGTCCAGGACCGAGTGGCGATCGCCGATGGCC TCCTCGGGAAGGAGTCGTTACGGACGATCGCCGGGCGGATCGGCAAAAACGTTTCCACGGTGTCGCGGGAGATTCGTGCG CGCAGCATTGATGGCCGCTATCTGCCGTATCACGCCGATCGGGCGGCTGCCTCGGCCCGGGCTCGGCCCAAGCAGTCCAA ACTGGTGGTCAACGTGGTCCTGCGGGGAGCGGTTGAAGAAGGCCTGTCGCGCAAGCTGTCACCGGAGCAGATCTCCAATC GCCTCCGTCGGGATCATCCCGACGACGAGAGCATGCAGGTGAGCCACGAAACGATCTACCAAGCCCTCTACTTCCAGGCC CGCGGTGGCCTCAAAAAGGAAGTGCAGCAAGCACTTCGAACCGGGCGCACCCGACGCAAACCACACCGCAAAGAAGGCGA GCGCTATCAGCGCTTCACCGACCCGATGGTGATGATCAGCGACCGCCCAGCCGAGGTGGACGACCGTGCGGTTCCCGGGC ATTGGGAAGGGGATTTGATCACCGGGGAGAAGAACCAGACCGCGATCGGCACTCTGGTCGAGCGATCGACGCGCTACACC ATGCTGGTGCACCTGCCAGGCGGGCACGACGCCGAATCGGTACGGGATGCGCTAATTGCGACTATCAGCACTCTTCCGGC GCATCTGCGTGGCTCACTGACTTGGGACCAAGGCTGCGAGATGGCAGGGCACAAGCAGTTCACGATGGCCACCGATATGG CCGTGTACTTCTGCGATCCGGCCAGTCCCTGGCAGCGCGGCAGCAACGAGAACACCAACGGCCTGCTGCGCCAGTACTTC CCCAAAGGCACCGACCTGAGCATCTACGGACCCGAGGACCTCGAACACGTCGCCCAGGAACTCAACGGCCGCCCACGCAA AACGCTCGGCTGGGATACCCCAGCCGAGCGCCTGCGTGATCTACTACTGACCAATTAA Protein sequence : MRGCGDRVVSEDCVRFGDRLARLFKAGVPVKEAAVATGVSRDRCYAILRAIGRPVGQARGRGERADQRGVADLGVVVAVF KDTGSILQAATACGVSHSTARKLLVAEGLVTSGKIPWGKPEAKRRCLELFEQGWSTGAAAREVGVNVRTARDWRKGIRHT NNTRVHPDGRVVDYTDQTVYKQSVSNLICDDTGRPAIDDRYLSVQDRVAIADGLLGKESLRTIAGRIGKNVSTVSREIRA RSIDGRYLPYHADRAAASARARPKQSKLVVNVVLRGAVEEGLSRKLSPEQISNRLRRDHPDDESMQVSHETIYQALYFQA RGGLKKEVQQALRTGRTRRKPHRKEGERYQRFTDPMVMISDRPAEVDDRAVPGHWEGDLITGEKNQTAIGTLVERSTRYT MLVHLPGGHDAESVRDALIATISTLPAHLRGSLTWDQGCEMAGHKQFTMATDMAVYFCDPASPWQRGSNENTNGLLRQYF PKGTDLSIYGPEDLEHVAQELNGRPRKTLGWDTPAERLRDLLLTN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CDC7B_2034 | YP_005163475.1 | transposase-like protein | Not tested | Not named | Protein | 6e-59 | 47 |
| DIP0764 | NP_939135.1 | transposase | Not tested | Not named | Protein | 1e-59 | 47 |
| CDC7B_2059 | YP_005163500.1 | transposase-like protein | Not tested | Not named | Protein | 3e-59 | 47 |
