|
Name : ureC (Mkms_2849) Accession : YP_938833.1 Strain : Mycobacterium sp. KMS Genome accession: NC_008705 Putative virulence/resistance : Virulence Product : urease subunit alpha Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0804 EC number : 3.5.1.5 Position : 2969423 - 2971144 bp Length : 1722 bp Strand : - Note : ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alp DNA sequence : GTGACCGGCCTGTCGCGCGAGCGCTACGCCGCGCTCTACGGTCCGACCACCGGTGACCGCATCCGGCTGGCCGACACCGA CCTCGTCATCGAGATCACCGAAGACCGCAGCGGCGGAACGGGACTCGCAGGTGACGAAGCCGTGTTCGGCGGCGGCAAGG TGCTGCGCGAGTCGATGGGCCAGTCCAGGGCCACCCGCGCAGACGGTGCCCCCGACACCGTCATCACCGGCGCCGTCATC CTCGATCACTGGGGAATCATCAAGGCCGACATCGGCATCCGCGACGGTCGCATCGTCGCGATCGGCAAGGCCGGCAATCC CGACATCATGGACGGCGTGCACCCCGATCTGGTGGTCGGGCCGTCGACCGAGATCATCGCCGGCAACGGTCGGATCCTCA CGGCGGGTGCGATCGACTGCCACGTCCACCTGATCTGCCCGCAGATCATGGAGGAGGCGCTCGGCGGCGGGATCACGACG ATCGTCGCGGGCGGAACCGGACCGGCGGAGGGCAGTAAGGCCACCACCGTCACACCGGGGGCCTGGCATCTGGCCCGCAT GCTCGAGGCACTCGACACCTGGCCGCTCAACGTGGTGCTCCTGGGCAAGGGCAACACGGTGTCGGCCGAGGCGATGTGGG AGCAGTTGCGCGGTGGCGCAGCCGGTTTCAAGCTGCACGAGGACTGGGGCACCACACCGGCCGCGATCGACGCGTGCCTC ACCGTCGCCGACGCGGCGGGTGTTCAGGTCAACATCCACACCGACACGCTCAACGAGATGGCCTTCGTCGAGGACACCCT GGCGGCGATCAAGGGCAGGTCGATCCACGCCTACCACACCGAGGGCGCAGGCGGCGGCCACGCACCCGACATCATCACCG TCGCCTCGCACCCCAACGTGCTGCCGAGTTCGACCAACCCGACCCGCCCGCACACCGTCAACACCCTCGACGAACACCTC GACATGCTGATGGTGTGCCACCACCTCAACCCCAGCGTCCCCGAGGATCTCGCGTTCGCCGAGAGTCGCATCCGGCCGTC GACCATCGCCGCCGAGGACCTGCTGCACGACATCGGGGCGATCTCGATGATCGGCAGCGACGCCCAGGCGATGGGGCGGA TCGGCGAGGTGGTGCTGCGCACCTGGCAGACCGCGCACGTGATGAAGCGCCGCCGAGGCGCGCTCGAGGGTGACGGACGG GCCGACAACAACCGGGCGCGCCGCTACGTCGCCAAGTACACGATCTGCCCGGCGGTCGCGCACGGCCTCGACGGCGAGAT CGGCTCGGTCGAGGTCGGCAAGCTCGCCGACCTCGTCCTGTGGGAGCCGGCGTTCTTCGGTGTCCGCCCGCACGCGGTCA TCAAGGGCGGGATGATCGCATGGGCCGCCATGGGTGACGCCAACGCGTCGATCCCGACACCGCAACCGGTGCTGCCGCGC CCGATGTTCGGTGCCGCACCCGCTGCGGCCGCCGCCACGTCGGTGCACTTCGTCTCACCGCAGGCGATCGAGGACGGCCT CGCCGACCGCATCGACGTCCGGCGGAGCCTGATCGCCGTCGCGGACTGCCGGCACGTCGGGAAGGCTCAGATGCCGCTCA ACGACGCCATGCCCCGCATCGAGGTCGATCCGGACACCTTCACCGTGCGCATCGACGGCGACGTGTGGCAGGAGCAGCCG GCCGCCGAACTCCCGATGGCGCAGCGGTACTTCCTGTTCTGA Protein sequence : MTGLSRERYAALYGPTTGDRIRLADTDLVIEITEDRSGGTGLAGDEAVFGGGKVLRESMGQSRATRADGAPDTVITGAVI LDHWGIIKADIGIRDGRIVAIGKAGNPDIMDGVHPDLVVGPSTEIIAGNGRILTAGAIDCHVHLICPQIMEEALGGGITT IVAGGTGPAEGSKATTVTPGAWHLARMLEALDTWPLNVVLLGKGNTVSAEAMWEQLRGGAAGFKLHEDWGTTPAAIDACL TVADAAGVQVNIHTDTLNEMAFVEDTLAAIKGRSIHAYHTEGAGGGHAPDIITVASHPNVLPSSTNPTRPHTVNTLDEHL DMLMVCHHLNPSVPEDLAFAESRIRPSTIAAEDLLHDIGAISMIGSDAQAMGRIGEVVLRTWQTAHVMKRRRGALEGDGR ADNNRARRYVAKYTICPAVAHGLDGEIGSVEVGKLADLVLWEPAFFGVRPHAVIKGGMIAWAAMGDANASIPTPQPVLPR PMFGAAPAAAAATSVHFVSPQAIEDGLADRIDVRRSLIAVADCRHVGKAQMPLNDAMPRIEVDPDTFTVRIDGDVWQEQP AAELPMAQRYFLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ureC | NP_286680.1 | urease subunit alpha | Virulence | TAI | Protein | 7e-159 | 61 |
| ureC | NP_287088.1 | urease subunit alpha | Not tested | TAI | Protein | 7e-159 | 61 |
| ureC | YP_005684266.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 6e-156 | 57 |
| ureC | YP_005682174.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 7e-156 | 57 |
| ureC | YP_003784325.1 | urease subunit alpha | Not tested | PiCp 7 | Protein | 7e-156 | 57 |
| ureC | YP_005686358.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 7e-156 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ureC | YP_938833.1 | urease subunit alpha | VFG0270 | Protein | 8e-141 | 55 |
