Gene Information

Name : Mkms_2657 (Mkms_2657)
Accession : YP_938642.1
Strain : Mycobacterium sp. KMS
Genome accession: NC_008705
Putative virulence/resistance : Virulence
Product : 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.8
Position : 2788424 - 2789926 bp
Length : 1503 bp
Strand : -
Note : KEGG: mmc:Mmcs_2613 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase

DNA sequence :
GTGACCGCGAACCGTCGGCCCGAGGGTGTACCGCAGCGCATCCAGCACTTCATCGGCGGGAAGTTGGTCGACAGCCTTGC
CGACACGTGGTTCGACGTCATCGATCCGGTGACCAACCAGCCGTACGCGCAGGCCGCCGCAGGACAGGCCGACGATGTCG
ACCGCGCGGTGGCCGCGGCCAAAGTCGCCTTCCGGACCGGGCCCTGGCCGAACATGCAGGCCCGGAGCCGTTCCCGGGTG
CTGAACAGAATCGCGGACGCCATCGAGAGCCGCGATGCGCGGCTGGCCGAGTTGGAGTCGTTCGACAGCGGCCTGCCGAT
CACGCAGGCGCTCGGCCAGGCCCGCCGCGCCGCCGAGAACTTCCGCTTCTTCGCCGACCTGGTGGTGGCGCAGGCCGACG
ACGCCTACAAGGTGCCCGGCAGCCAGATCAACTACGTCAACCGCAAACCAAAAGGTGTCGCCGGCCTGATCACGCCATGG
AACACCCCGTTCATGCTGGAGAGCTGGAAGTTGGCGCCGGCCTTGGCATCCGGATGCACCGTCGTATTAAAACCCGCCGA
ATTCACTCCGCTGTCCGCTGGACTGTGGGCCGACATCTTCCGCGACGCGGGCGTTCCCGATGGGGTGTTCAACTTGGTCA
ACGGCATTGGCGAAGAAGCCGGCGACGCGTTGGTCAAGCATCCCGACGTCAGAGTCATCTCCTTCACCGGTGAGTCGGCC
ACCGGCGAGATCATCTTCCGCAACTGCGCCACCGGCCTCAAAGGCATGTCGATGGAACTCGGCGGCAAATCACCGGCGGT
GGTGTTCGCCGATGCCGACCTCGACGCCGCCCTGGACTCCACGCTGTTCGGTGTCTTCTCACTCAACGGCGAGCGATGCA
CGGCGGGCAGCCGCATCCTCGTCGAAGAGGAGATCTACGACGAATTCGTCGAACGGTTTGCCGCGCGGGCGGCCGGCATT
GTGGTCGGGGATCCCCAGGATCCACGGACCGAGGTGGGTGCCCTGGTCCATCCTGAGCATTTCGCCAAAGTGATGTCCTA
CATCGACGTCGGCAAGACAGAGGGACGGCTGCTGTGTGGGGGTGGGCGGCCGGCGCATCTGCCGCAGGGCAACTTCGTGG
CGCCGACGGCCTTCGCCGATGTGGAGCCGAACGCGCGGATCTTTCAGGAGGAGATCTTCGGACCGGTGGTCGCGCTGTCG
CGATTCCAGACCGAAGAGCAGGCGCTCGCGTTGGCTAATGGCGTGAAATACGGTCTGGCTGCTTACATCTGGACCAACGA
CCTCAAACGTGCCCACCGGTTCGCGCAGAATGTCGACAGCGGCATGGTGTGGGTCAACTCCCACAACGTTCGCGATCTGC
GCACCCCCTTCGGCGGAGTCAAGGCCTCGGGCCTTGGCCACGAAGGTGGCTACCGGTCCCTGGACTTCTACACCGACCAG
CAGGCTGTGCACATCACCCTCGGCGACGTCCACACACCGAGATTCGGCATCACCGCCCGCTGA

Protein sequence :
MTANRRPEGVPQRIQHFIGGKLVDSLADTWFDVIDPVTNQPYAQAAAGQADDVDRAVAAAKVAFRTGPWPNMQARSRSRV
LNRIADAIESRDARLAELESFDSGLPITQALGQARRAAENFRFFADLVVAQADDAYKVPGSQINYVNRKPKGVAGLITPW
NTPFMLESWKLAPALASGCTVVLKPAEFTPLSAGLWADIFRDAGVPDGVFNLVNGIGEEAGDALVKHPDVRVISFTGESA
TGEIIFRNCATGLKGMSMELGGKSPAVVFADADLDAALDSTLFGVFSLNGERCTAGSRILVEEEIYDEFVERFAARAAGI
VVGDPQDPRTEVGALVHPEHFAKVMSYIDVGKTEGRLLCGGGRPAHLPQGNFVAPTAFADVEPNARIFQEEIFGPVVALS
RFQTEEQALALANGVKYGLAAYIWTNDLKRAHRFAQNVDSGMVWVNSHNVRDLRTPFGGVKASGLGHEGGYRSLDFYTDQ
QAVHITLGDVHTPRFGITAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaE AAO17179.1 HpaE Not tested tcd island Protein 7e-93 49
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-64 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-64 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-64 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-64 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-64 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mkms_2657 YP_938642.1 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase VFG0082 Protein 8e-65 41