Gene Information

Name : Mkms_1484 (Mkms_1484)
Accession : YP_937485.1
Strain : Mycobacterium sp. KMS
Genome accession: NC_008705
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1596254 - 1597093 bp
Length : 840 bp
Strand : +
Note : PFAM: Integrase, catalytic region; KEGG: mmc:Mmcs_2594 integrase, catalytic region

DNA sequence : 
GTGGCCCCGAGCACCTACTACGACGCCAAAACCCGCCCACCGTCGGCGCGGGCACAGCGCGATGCAGTCCTGGGGCCGGC
GTTGCGCCAGCTCTGGAAGGACAACTACTGCGTCTATGGGGCTCACAAGCTGTGGAAAACCGCCCGCCGGGCTGGCTATG
ACGTCGGCCGCGACCAGGTGGCCCGACTGATGCGGGCCGCCGGAATCCAGGGGGTACGGCGCGGCAAACGTGTCCGCACC
ACCAAACCTGACCCGGTAGCAGCGCGGCACCCGGACCTGGTGAAGCGCAAGTTCACCGCGACGGCCCCGAACCAGCTCTG
GGTGACCGACCTGACGTTCGTGCCGACATGGGCCGGGGTGGCCTATGTGTGCTTCATCGTCGATGCGCACTCGCGGATGA
TCGTGGGGTGGCGGGTAGCGTCGCATATGCGCACTTCCATGGTGCTAGACGCGTTGGAGATGGCACGCTGGTCACGCGGA
ACTACATTGCAGAACTTGATATGTCACTCCGATGCCGGGTCGCAATTCACCTCGATTCGCTACGGAGAGCGCCTCGCTGA
GATCGGCGGCGTCCCATCCATCGGCACCGTCGGGGACAGCTTCGATAACGCCCTCGCCGAGACGGTCAACGGATACTACA
AAGCCGAGCTGATCTACGGGCCGGCCCGCAGCGGGCCGTGGAAGACCGTCGAAGACGTCGAACTTGCCACCCTCAGCTGG
GTCTACTGGCACAACACCAGCCGCCTGCACAGCTACCTTGGCGACCTCCCGCCGGCCGAGTTCGAAGCGGCGTTCTACGA
TGCATCCCGGAGCGGCCAACCCCTGGTCGAAATCCAATAG

Protein sequence : 
MAPSTYYDAKTRPPSARAQRDAVLGPALRQLWKDNYCVYGAHKLWKTARRAGYDVGRDQVARLMRAAGIQGVRRGKRVRT
TKPDPVAARHPDLVKRKFTATAPNQLWVTDLTFVPTWAGVAYVCFIVDAHSRMIVGWRVASHMRTSMVLDALEMARWSRG
TTLQNLICHSDAGSQFTSIRYGERLAEIGGVPSIGTVGDSFDNALAETVNGYYKAELIYGPARSGPWKTVEDVELATLSW
VYWHNTSRLHSYLGDLPPAEFEAAFYDASRSGQPLVEIQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 1e-41 52
tnpC AAD44736.1 TnpC Not tested SHI-2 Protein 6e-40 51
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 2e-41 51
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 2e-45 50
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 1e-48 49
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 1e-48 49
CDCE8392_1958 YP_005134489.1 transposase-like protein Not tested Not named Protein 8e-37 49
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 9e-48 48
Z1221 NP_286756.1 transposase Not tested TAI Protein 5e-49 48
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 5e-49 48
Z1198 NP_286733.1 transposase Not tested TAI Protein 2e-48 48
Z1638 NP_287141.1 transposase Not tested TAI Protein 2e-48 48
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 4e-47 48
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 2e-47 48
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 2e-48 48
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-48 48
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 1e-48 48
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 4e-47 48
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 4e-47 48
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 2e-48 48
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 1e-48 48
CDCE8392_1774 YP_005134308.1 transposase-like protein Not tested Not named Protein 6e-34 48
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 6e-49 48
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 3e-45 47
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-31 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mkms_1484 YP_937485.1 integrase catalytic subunit VFG1602 Protein 2e-45 47