Gene Information

Name : basR (azo0975)
Accession : YP_932479.1
Strain : Azoarcus sp. BH72
Genome accession: NC_008702
Putative virulence/resistance : Virulence
Product : two-component response regulatory protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1047710 - 1048396 bp
Length : 687 bp
Strand : +
Note : Probable two-component response regulatory protein,Response_reg. IPR001867; Trans_reg_C. Pfam: PF00072; response_reg. PF00486; trans_reg_C. SMART: SM00448; REC.; Specificity unclear

DNA sequence : 
ATGCGCATTCTTCTGGCGGAAGACGACCCCGTCATTGCCGACGGCATCGTGCGGGCGCTCAAGCGCGGGGGGTACGCGGT
GGATCACGTGGGCAATGGCGCCGAAGCCGACACCGCGGTGGCGTCGCAGCCTTTCGATCTGCTGATCCTCGACCTCGGCC
TGCCGCGCCTGCCCGGCATCGAAGTGCTGAAACGGCTGCGGGCGCGCAAGTCCGCGCTGCCGGTGCTGATCCTCACTGCG
CAGGATGGCGTCGAGGACCGTGTCCGCGGGCTCGATGCGGGGGCCGACGACTACCTGACCAAGCCCTTTGCGCTGCCGGA
ACTCGAGGCGCGGGTGCGGGCACTGACGCGGCGCGGCACCGGGCAGCCGCGCTGCATCGAAGTGGGGAACCTGAGCTACG
ACCAGGCCGACCGGGTGGTAAAGATCTGCGGTCAGGTGGTGGAGTTGTCGGCGCGTGAGATCGGCCTGCTCGAGGTCTTC
ATCCTGCGTGTCGGGCGCCTGGTCAGCAAGGACCAACTCGTGGATCACCTGTGCGGCTGGGGCGAAGAGGTATCGAGCAA
CGCCATCGAGGTCTACGTTCATCGCCTGCGCAAGAAGCTGGAGGCAAGCGGGGTGCGCATCGTGACCGTGCGCGGGCTGG
GGTATTGCCTGGAAAACCCCGATGCGGCCCCGACGCAAAAAGTCTGA

Protein sequence : 
MRILLAEDDPVIADGIVRALKRGGYAVDHVGNGAEADTAVASQPFDLLILDLGLPRLPGIEVLKRLRARKSALPVLILTA
QDGVEDRVRGLDAGADDYLTKPFALPELEARVRALTRRGTGQPRCIEVGNLSYDQADRVVKICGQVVELSAREIGLLEVF
ILRVGRLVSKDQLVDHLCGWGEEVSSNAIEVYVHRLRKKLEASGVRIVTVRGLGYCLENPDAAPTQKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-34 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
basR YP_932479.1 two-component response regulatory protein BAC0487 Protein 2e-31 44
basR YP_932479.1 two-component response regulatory protein BAC0638 Protein 8e-26 44
basR YP_932479.1 two-component response regulatory protein BAC0083 Protein 2e-31 42
basR YP_932479.1 two-component response regulatory protein BAC0347 Protein 5e-29 41
basR YP_932479.1 two-component response regulatory protein NC_002516.2.879194.p Protein 3e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
basR YP_932479.1 two-component response regulatory protein VFG0473 Protein 4e-34 43
basR YP_932479.1 two-component response regulatory protein VFG1390 Protein 6e-28 43