|
Name : nasD (azo0944) Accession : YP_932448.1 Strain : Azoarcus sp. BH72 Genome accession: NC_008702 Putative virulence/resistance : Unknown Product : putative nitrate transport system ATP-binding protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1116 EC number : 3.6.3.23 Position : 1013436 - 1014230 bp Length : 795 bp Strand : + Note : Part of the ABC transporter complex nasFED involved in nitrate import. 64% Similar to the nitrate transport membrane protein, nasD in Klebsella oxytoca. Probably responsible for energy coupling to the transport system. SWISSPROT:NASD_KLEOX.P39459. InterPr DNA sequence : ATGAGCAAGAAGATCGTCCAGATCGAAAAGGTCAGCCAGACCTTCGAGACCAAGAAGGGCAAGTTCACCGCGCTGCGCGA CATCCACCTCGACATCCACGAGGGCGAGAGCATCAGCCTGATCGGCCACTCCGGCTGCGGCAAATCGACGCTGCTCAACC TCATCGCCGGCCTCACCCGGCCGACCTCGGGGGTGATGCTGTGCGACGGTCGCGAGATCGCCGGTCCCGGCCCGGAGCGC GCGGTGGTGTTCCAGAACCACTCGCTGCTGCCGTGGCTGACCTGCTTCGACAACGTCTATCTCGCGGTGGAACGCGTCTT CGCCCGCAAGGAAGGCAAGGCCAAGCTCAAGCAGCGCACCCACGAGGCGCTCGCGCTGGTCGGCCTGACCCACGCCGAGA ACAAGTATCCGCACGAGATCTCCGGCGGCATGAAGCAGCGCGTCGGGATCGCCCGCGCGCTGTCGATGCAGCCGCGCATC CTGCTGATGGACGAGCCGTTCGGTGCGCTCGATGCGCTGACCCGCGCTAACCTGCAGGACGAGCTGATGAAGATCCTCGC CGCCACCAAGGCCACCATGGTGATGGTCACCCACGACGTGGATGAGGCGGTGCTGCTGTCCGACCGGGTGGTGATGCTGA CCAACGGCCCGGCGGCCACCATCGGCGAGATCCTCGAGGTCAAGCTGGAGCGCCCGCGCGACCGCCTGGCGCTGGCACAC GACCCGCAGTTCGGCGAATGCCGCGCCGCGATCATGGAGTTCCTGTACCAGAAGCAGTTGCGCGTCGCGGCCTGA Protein sequence : MSKKIVQIEKVSQTFETKKGKFTALRDIHLDIHEGESISLIGHSGCGKSTLLNLIAGLTRPTSGVMLCDGREIAGPGPER AVVFQNHSLLPWLTCFDNVYLAVERVFARKEGKAKLKQRTHEALALVGLTHAENKYPHEISGGMKQRVGIARALSMQPRI LLMDEPFGALDALTRANLQDELMKILAATKATMVMVTHDVDEAVLLSDRVVMLTNGPAATIGEILEVKLERPRDRLALAH DPQFGECRAAIMEFLYQKQLRVAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABA47263.1 | ABC transporter | Not tested | S-PAI | Protein | 4e-42 | 42 |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 4e-30 | 41 |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 3e-31 | 41 |
