Gene Information

Name : azo0071 (azo0071)
Accession : YP_931576.1
Strain : Azoarcus sp. BH72
Genome accession: NC_008702
Putative virulence/resistance : Virulence
Product : sigma-54 dependent response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 80784 - 82139 bp
Length : 1356 bp
Strand : +
Note : Sigma-54 dependent response regulator,; Specificity unclear

DNA sequence : 
ATGAACCCGGAATCCGCTCCCGCCAGCGCGCCCCAGCAGTCCGTCCTGGTGGTCGATGACGAACAGGGCATGCGCAACTT
CCTCAGCCGTGCGCTGGCCTTGCGCGGCTTCGTGGTGGACACCGCCGAATCCGCCGAAGAAGGCGCCGAAAAACTCGCTG
CCACGCGCTTCGACCTGGTGATCCTGGACATCGCGCTGCCCGGCAAGGCCGGCATCGAATGGCTGCAGGATCTCACCGCG
GCGGGCTTTGCCGGCGAAGTGATCCTGATCACCGCGTTCGCCGACATGCAGACCGCGATCGACGCGCTGCGCGCCGGCGC
CGCGGACTTCATCCTGAAGCCCTTCCGCATCGACCAGATCCTCAACTCGATCCACCGCTCCACCGAACGCGCCCGCCTCG
CGCGCGAGAACTTCCTGCTGCGCCGCCAGGTAGCCGGCAGCGGCAGCGCGAGCGACGGCATGATCGGCGCCTCGCCGGCG
ATCGGCCAGTTGCGCCAGATCCTGCACCGCATCGCGCCGACGCCCTCCACCGTGCTGATCCAGGGCGAATCCGGGGTCGG
CAAGGAAGTGGTGGCGCGCGCGCTGCATCAGCTCTCGCCGCGCGCCGAACAACCTTTCGTCGCGGTCAATTGCGCGGCGA
TCTCGGCCGAGCTGATCGAGTCCGAACTCTTCGGCCACGTGAAGGGTGCCTTCACCGGCGCGCGCGAGGCGCGCAACGGC
CTGTTCCACTACGCCCACGGCGGCACCCTGTTCCTGGACGAGATCGGCGAGTTGCCGCTGGCCCTGCAATCCCGCCTGCT
GCGCGTGCTGGAAGAACGCAAGGTGCGCCCGGTGGGCACCGAACAGGAAGTGCCGGTGGATGTGCGCGTGCTCGCCGCCA
CCAACCGCGACCTGCGTGCCGAGGTGGCGGCGTGCCGCTTCCGTGAGGACCTGTTCTACCGCCTCGAAGTGATCACGCTG
ACGGTGCCGCCACTGCGCGAGCGCGCGGAGGACGTACCGGCGCTGGCGGCGGCCTTCATGCAGCAGCTGGCGATGCAGCT
CGGCCTGCCGCCGCTGCTGATCTCGCCCGAGGTGTCGGCGCGGCTGATGGCGCACCCCTGGCCGGGCAACGTGCGCGAAC
TGCGCAATTTCGTCGAACGTTCGCTGCTGTTCGGCGATTTTCCGCTCGCCAGCCTGGCCGGCGCGGTGGCACCGCCGCCG
CCCGCCTCCGCCGCGCCGCTGCTGCTCGAAGAGGTGGAGAAGCGCCACATCCTCGCGGTGCTCGACCAGTGCGGCGGCAA
CAAGACGCGCGCCGCGGAACTGCTCGGCGTGTCGCGCAAGACCCTGGAACGCAAGTGCGCGGAGTGGTCGGTATGA

Protein sequence : 
MNPESAPASAPQQSVLVVDDEQGMRNFLSRALALRGFVVDTAESAEEGAEKLAATRFDLVILDIALPGKAGIEWLQDLTA
AGFAGEVILITAFADMQTAIDALRAGAADFILKPFRIDQILNSIHRSTERARLARENFLLRRQVAGSGSASDGMIGASPA
IGQLRQILHRIAPTPSTVLIQGESGVGKEVVARALHQLSPRAEQPFVAVNCAAISAELIESELFGHVKGAFTGAREARNG
LFHYAHGGTLFLDEIGELPLALQSRLLRVLEERKVRPVGTEQEVPVDVRVLAATNRDLRAEVAACRFREDLFYRLEVITL
TVPPLRERAEDVPALAAAFMQQLAMQLGLPPLLISPEVSARLMAHPWPGNVRELRNFVERSLLFGDFPLASLAGAVAPPP
PASAAPLLLEEVEKRHILAVLDQCGGNKTRAAELLGVSRKTLERKCAEWSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 4e-58 41
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 4e-58 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
azo0071 YP_931576.1 sigma-54 dependent response regulator BAC0089 Protein 8e-67 46
azo0071 YP_931576.1 sigma-54 dependent response regulator BAC0467 Protein 1e-62 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
azo0071 YP_931576.1 sigma-54 dependent response regulator VFG1214 Protein 7e-65 45
azo0071 YP_931576.1 sigma-54 dependent response regulator VFG1249 Protein 2e-60 45
azo0071 YP_931576.1 sigma-54 dependent response regulator VFG0116 Protein 3e-49 44