|
Name : recG (azo0477) Accession : YP_931981.1 Strain : Azoarcus sp. BH72 Genome accession: NC_008702 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : 3.6.1.- Position : 513369 - 515408 bp Length : 2040 bp Strand : + Note : catalyzes branch migration in Holliday junction intermediates DNA sequence : GTGCAGTCGGGCTGGGCGGGACTGGGCGAGCAGCTCGCCTCGCGCCTGCGCAAGCTGGACCTGCACCGGCAGGAGGACCT CGTCGTCCACCTGCCGCTGCGCTATGAGGACGAAACCCGGCTGACGCCGATCGGCGTCGCCCGCGCCGGCTTTCCGGCGC AGATCGAAGGCGAGGTCACCTCCTGCGAAGTCGTGCTGCGCCCCCGCCGCCAGTTGGTGGCGCGGGTGCGCGACGATTCG GGCACGCTGGTCGCGCGCTGGATCAATTTCTACCCTTCGCAGCAGAAGCAGCTTGCGGTCGGGCGCCGTGTGCGGCTGTT CGGCGAAGTGCGGGGCGGCTTCTTCGGCGACGAGATGGTGCATCCGCGGGTGCGCAACATCGACCCCGGTGAAGGCTTGC CGGAGGCGCTGACGCCGGTGTATCCGACCACCGCCGGGCTGGGCCAGACCACGCTGAGGAAGCTGATCGACCGCGCGCTG AAGACGGTGCCGCTGCAGGATCTGCTGCCGGAAGACGCGCGCCGCGCGCTCGACCTGCCCGGCTTCGCCGAGGCGCTGAC CGCGCTGCACCACCCGGCGCCGGATGCCGATCCGATCGCGCTGGAGAACCGCGAGCATCCGGCCTGGCGGCGCATCAAGT TCGAGGAACTGCTGGTGCAGCAGCTCTCGCTGCGGCGCGCCTACAACGCCCGCCGGGCGCGCGAGGCGGTGGTGCTGCCG GCGCGCCAGCAGCTCACCGCCGGACTGGTCCGCGGCCTGCCGTTCGCGCTCACCAGCGCGCAGCAGCGCGCGGTCGGCGA GATCGCCGCCGACCTCGGCGCCGCCCATCCGATGCAGCGCCTGCTGCAGGGCGACGTCGGCAGCGGCAAGACCATCGTCG CCGCGCTCGCCATGCTGCAGGCCGCCGAGAACGGCTGGCAAGCGGCGCTGATGGCGCCGACCGAAATCCTTGCCGAACAG CACTACAAGAAGCTCGCCGCCTGGCTGGAGCCGCTTGGCGTCGGCATCGCCTGGCTGTCGGGCAGCCGCAGGAAGCGCGA GCGCGAGGCCGAACTTGCCAGGTTGCAGAGCGGCGAGGTGCTGCTCGCCGTCGGCACCCATGCGCTGATCGAGGACGAGG TCGCACTGCCGCGCCTCGCGCTGGCGATCATCGACGAGCAGCACCGTTTCGGCGTGCGCCAGCGCCTGGCGCTGCGCGAG AAGGGCGCGCACGGCCTGCGCCCGCACATGCTGATGATGTCGGCCACGCCGATCCCGCGCACGCTCGCGATGACCCACTA CGCCGACCTCGACGTCTCGGTGCTCGACGAACTGCCGCCCGGGCGTACGCCGATCCGCACCAAGCTGGTGTCGGACGCGC GCCGGGAGGAGGTCGTCGGCCGTGTGCGCGACGCCTGCCTGCAGGGCCGCCAGGCCTACTGGGTGTGCCCGCTGATCGAG GAGTCCGAGGCGCTGCAACTGCAGACCGCGCTCGACACCTACGCCGCGCTGTCGGAGGCGCTGCCCGAACTGCGCGTGGG CCTGGTGCACGGCCGCCTGAAGGCCGACGAGAAGTCGGCGACGATGGCCGCCTTTTCCGCCGGCGAGCTGCAGGTGCTGG TGGCGACCACGGTGATCGAGGTCGGCGTGGATGTGCCCAATGCGAGCCTGATGGTGATCGAGCACGCCGAGCGCTTCGGC CTCGCCCAGTTGCACCAGCTGCGCGGGCGGGTCGGGCGCGGCACCGCGGAATCGGTATGCATCCTGCTGTTCGCCCAGCC GCTGTCGGAGAACGGGCGCGCGCGGCTGAAGGTCATCTATGAACACACCGACGGCTTCGCGATCGCGCGTGAGGATCTGC AACTGCGCGGCCCGGGCGAATTCGTCGGTGCCCGGCAGAGCGGCGTGCCGCTGCTGCGCTACGCCGATCTGGAACTCGAC GCCGGGTTGATCGAACCCGCGCGCGCACTTGCCGAACGCATGCTGCGCGACGCCCCCGCCCAGGCCGATGCGCTGATGCA GCGCTGGCTCGGTGGGCGGGAGTCGCTGCTGCGCGCCTGA Protein sequence : MQSGWAGLGEQLASRLRKLDLHRQEDLVVHLPLRYEDETRLTPIGVARAGFPAQIEGEVTSCEVVLRPRRQLVARVRDDS GTLVARWINFYPSQQKQLAVGRRVRLFGEVRGGFFGDEMVHPRVRNIDPGEGLPEALTPVYPTTAGLGQTTLRKLIDRAL KTVPLQDLLPEDARRALDLPGFAEALTALHHPAPDADPIALENREHPAWRRIKFEELLVQQLSLRRAYNARRAREAVVLP ARQQLTAGLVRGLPFALTSAQQRAVGEIAADLGAAHPMQRLLQGDVGSGKTIVAALAMLQAAENGWQAALMAPTEILAEQ HYKKLAAWLEPLGVGIAWLSGSRRKREREAELARLQSGEVLLAVGTHALIEDEVALPRLALAIIDEQHRFGVRQRLALRE KGAHGLRPHMLMMSATPIPRTLAMTHYADLDVSVLDELPPGRTPIRTKLVSDARREEVVGRVRDACLQGRQAYWVCPLIE ESEALQLQTALDTYAALSEALPELRVGLVHGRLKADEKSATMAAFSAGELQVLVATTVIEVGVDVPNASLMVIEHAERFG LAQLHQLRGRVGRGTAESVCILLFAQPLSENGRARLKVIYEHTDGFAIAREDLQLRGPGEFVGARQSGVPLLRYADLELD AGLIEPARALAERMLRDAPAQADALMQRWLGGRESLLRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 6e-106 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| recG | YP_931981.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 3e-150 | 55 |
