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Name : clpB2 (azo3903) Accession : YP_935405.1 Strain : Azoarcus sp. BH72 Genome accession: NC_008702 Putative virulence/resistance : Virulence Product : putative ATP-dependent Clp protease, ATP-binding subunit ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 4280714 - 4283434 bp Length : 2721 bp Strand : + Note : Putative ATP-dependent Clp protease, ATP-binding subunit ClpB. Homology to clpB of E. coli of 38% (sprot|CLPB_ECOLI). The protein is thought to be subunits of ATP-dependent proteases which act as chaperones to target the proteases to substrates. Pfam: ATP DNA sequence : ATGAGCGAAATCAGTCGGGTAGCCTCGTTCGGCAAACTCAACAGCCTCGCCTACAAGGCGATGGAAGGCGCCACCGTCTT CTGCAAGCTGCGCGGCAATCCCTATGTGGAGCTGGAACACTGGCTGCAGCAGCTGCTGCAGAACGAGGACACCGACCTGC ACCGCATCGTGCGCCACTTCGACGTGGACGCGGCGCGCCTGGCCGCCGACATGACCACCGCGCTCGACCGCCTGCCGCGC GGCTCGACCTCGATCTCGGGCCTCTCCGAAAACCTCGACACGCTCGTCGAACGCGGCTGGGTGTATGCCTCTCTGATGTT CGGCGACCGCCAGATCCGCTCCGGCTACCTGCTGGTCGGCATGCTCAAGACGCCCTCGCTGCGCAACGCGCTGATGGCGA TCTCGCGCCAGTTCGAGCGCGTGCGCCCCGATGTGCTGACCGACGAATTCACCAAGATCGTCGCCGGCTCGGCGGAAGAA AACCTCACCGCGCGCGATGGCTCGGGCGGCGCGCCGGGCGAGGACAGCGGCGCGATTGCGCCCGCGCAGATGGGCAAGCA GGAGGCGCTGAAGAAATTCACCGTCGACCTCACCGAGCAGGCCCGCTCCGGCAAGATGGACCCGATCGTCGGCCGCGACG AAGAAATCCGCCAGGTGGTCGACATCCTGATGCGCCGCCGCCAGAACAACCCCATCCTGGTCGGCGAGGCCGGCGTCGGC AAGACCGCGGTGGTCGAAGGCTTCGCCCAGCGCATCGCGCGCGGCGACGTGCCGCCGGCGCTCAAGGACGTCTCGCTGCT GGCGCTGGATGTCGGCCTGCTGCAGGCCGGCGCCAGCATGAAGGGCGAATTCGAGCAGCGACTGCGCTCGGTCATCGACG AAGTCCAGGCCAGCCCCAAGCCCATCATCCTGTTCGTCGATGAGACCCACACCCTGGTCGGCGCCGGCGGCGCGGCCGGC ACCGGCGATGCGGCCAACCTGCTCAAGCCGGCGCTCGCGCGCGGCACGCTGCGCACCGTCGGCGCCACCACCTGGGCCGA GTACAAGAAGTACATCGAGAAGGACCCGGCGCTGACCCGGCGCTTCCAGAACGTGCAGGTCGACGAGCCGGACGAGAAGA AGGCGGTGCTCATGATGCGCGGCGTTGCCAGCACCATGGAGAAGCACCACCAGGTGCAGATCCTCGACGAGGCGCTGGAG GCCGCGGTCAAGCTGTCGCACCGCTACATCCCGGCGCGCCAGCTGCCGGACAAGTCCGTCTCGCTGCTCGACACCGCCTG CGCCCGCGTCGCGGTGAGCCTGCACGCCACCCCGGCCGAGGTGGACGACAGCCGCAAGCGCATCGACGCGCTGAACACCG AGCTGGAAATCATCGGCCGCGAGAGCAACATCGGCATCGAGGTCGGCGAGCGCCGTGCCCATGCCGAGGCCCTGCTGGCC GAAGAACAGCAGCGGCTGGCCGAACTCGAGGCGCGCTGGGCGGCCGAGAAGACGCTGGTCGATGAACTCCTCGCGCTGCG CGCCAAGCTGCGCAGCGGCAGCCGCCCGGTGGAAGGCACCGGCAGCGCGCTGGAAGCCGCGGCCGAAGCGGCTGCGCCGG AGGCCGCCGCCGAGAGCGCGCCCGAACCCGAGCGCGAGGCGCTGTTCGCGCGCCTGCGCGAAGTGCAGGCCGAACTCGCC ACGCTGCAGGGCGAAGACCCGCTGATCCTGCCGACAGTGGACTACCAGGCGGTGGCCTCGGTGGTCGCCGACTGGACCGG CATCCCGGTCGGCCGCATGGCGCGCAACGAAATCGAGAACGTGCTGCGCCTGCCGCAGCTGCTCGGCCAGCGCGTCATCG GCCAGGACCACGCGATGGAGATGATCGCCAAGCGCATCCAGACTTCGCGCGCCGGGCTCGACAACCCCAACAAGCCGATC GGCGTGTTCATGCTCGCCGGCACCTCGGGCGTCGGCAAGACCGAAACCGCGCTGGCACTGGCCGAAGCGCTGTACGGCGG CGAGCAGAACGTCGTCACGATCAACATGAGCGAATTCCAGGAAGCGCACACCGTGTCCACGCTCAAGGGCGCGCCTCCGG GCTACGTCGGCTACGGCGAAGGCGGCGTGCTGACCGAGGCGGTGCGGCGCAAGCCCTACAGCGTGGTGCTGCTCGACGAG GTCGAGAAGGCCCACCCCGATGTGCACGAGATGTTCTTCCAGGTCTTCGACAAGGGCTTCATGGAAGACGGCGAAGGCCG CTTCATCGACTTCAAGAACACCCTGATCCTGCTCACCACCAATGCCGGCACCGACCTCATCGCCAGCATGTGCAAGGACC CCGACCTGCTGCCCGACCCGGAAGGCCTCGCCAAGGCGCTGCGCGACCCGCTGCTGAAGATCTTCCCGCCGGCGCTGCTC GGCCGCCTCGTCACCATTCCCTACTACCCGCTGACCGACGCCATGCTGGGCGCCATCGTCCGGCTGCAGCTCGGGCGCAT CAAGAAGCGCGTGGAAGCGCGCTACAAGATCCCGTTCGAGTATGGCGACGACGTGGTCGAGCTGGTGGTCAGCCGCTGCA CCGAGAGCGAATCCGGCGGCCGCATGATCGACGCCATCCTGACCAACACCATGCTGCCCGACATCAGCCGCGAGTTCCTG AACCGGACGATGGAAGGCAAGCCGATCGTGCGCGTGGCGATGGGAGTCGCGAATGCCGACTTCACCTACAACTTCGATTG A Protein sequence : MSEISRVASFGKLNSLAYKAMEGATVFCKLRGNPYVELEHWLQQLLQNEDTDLHRIVRHFDVDAARLAADMTTALDRLPR GSTSISGLSENLDTLVERGWVYASLMFGDRQIRSGYLLVGMLKTPSLRNALMAISRQFERVRPDVLTDEFTKIVAGSAEE NLTARDGSGGAPGEDSGAIAPAQMGKQEALKKFTVDLTEQARSGKMDPIVGRDEEIRQVVDILMRRRQNNPILVGEAGVG KTAVVEGFAQRIARGDVPPALKDVSLLALDVGLLQAGASMKGEFEQRLRSVIDEVQASPKPIILFVDETHTLVGAGGAAG TGDAANLLKPALARGTLRTVGATTWAEYKKYIEKDPALTRRFQNVQVDEPDEKKAVLMMRGVASTMEKHHQVQILDEALE AAVKLSHRYIPARQLPDKSVSLLDTACARVAVSLHATPAEVDDSRKRIDALNTELEIIGRESNIGIEVGERRAHAEALLA EEQQRLAELEARWAAEKTLVDELLALRAKLRSGSRPVEGTGSALEAAAEAAAPEAAAESAPEPEREALFARLREVQAELA TLQGEDPLILPTVDYQAVASVVADWTGIPVGRMARNEIENVLRLPQLLGQRVIGQDHAMEMIAKRIQTSRAGLDNPNKPI GVFMLAGTSGVGKTETALALAEALYGGEQNVVTINMSEFQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRKPYSVVLLDE VEKAHPDVHEMFFQVFDKGFMEDGEGRFIDFKNTLILLTTNAGTDLIASMCKDPDLLPDPEGLAKALRDPLLKIFPPALL GRLVTIPYYPLTDAMLGAIVRLQLGRIKKRVEARYKIPFEYGDDVVELVVSRCTESESGGRMIDAILTNTMLPDISREFL NRTMEGKPIVRVAMGVANADFTYNFD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 3e-130 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 3e-130 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB2 | YP_935405.1 | putative ATP-dependent Clp protease, ATP-binding subunit ClpB | VFG2076 | Protein | 0.0 | 77 |
| clpB2 | YP_935405.1 | putative ATP-dependent Clp protease, ATP-binding subunit ClpB | VFG2084 | Protein | 1e-141 | 42 |
