Gene Information

Name : sciC (azo3901)
Accession : YP_935403.1
Strain : Azoarcus sp. BH72
Genome accession: NC_008702
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3519
EC number : -
Position : 4277775 - 4279646 bp
Length : 1872 bp
Strand : +
Note : Putative cytoplasmic protein, sciC, 42% identity (57% similarity) to TrEMBL; Q93IT3. Has PF05947, Bacterial protein of unknown function (DUF879);IPR010272 ; This family consists of several hypothetical bacterial proteins of unknown function.; Function unc

DNA sequence :
ATGGATCCCCGGCTGCTGCGCTACTACAACCTCGAACTCCAGCACCTGCGCGAGATGGGCGCGGAGTTCGCGCGCCAGTT
TCCCAAGATCGCCGCGCGCCTCGGCATGGACGGCATCGAGGTCGCCGACCCCTATGTCGAGCGCCTGCTCGAAGGCGCGG
GTTTCCTGGCCGCGCGCGTGCAGCTCAAGCTCGACGCCGAATTCCCCCGCTTCACCCAGCGCCTGCTGGAGATGCTGCAC
CCGCACTACCTCGCGCCCACGCCGGCGATGCTGGTGGCGCAGTTCCGCCCGGTGCCGGGCGAGACCAACCTTGCGCGCGG
CTTCACGCTGCCGCGCGGCACGCCGTTCCGCAGCCCGCTCGGCAAGGGCGACGCCGCCGCGTGCGAATTCCGCACCGCGC
ACGAGATCCGGCTGTGGCCGCTGGAGTTGGTGCAGGCGCGCTACTTCAGCTTTGCCGCCGATCTTCCGCTGGCCCGCCTG
CCGCTCGCGGGGCGGGTACGCGGTGGGGTGCGGCTGACGCTGCGCACCACCGGCGGACTCAAGTTCAGCCAGCTCTCGCT
CGACACGCTGAACCTGCACCTCGGCGGCGCGCAGGAAGTGGCCTACCGGCTGTGCGAGCTGATCGGCGCGGCCTCGCTCG
GCGCGCTGGTGCAGCCCGCGGGCGGCAAGGGCGGCTGGCAGCGCTTCATCCCGTCGGAGCAGATCCGCCTGACCGGCTAC
GACGACGATCAGGCCCTGCTGCCCACTGCGCACCGCAGCTTCGGCGGCTACCGGCTGGTACAGGAGTACTTCTCCTTCCC
CGAACGCTTCCTGTTCTTCGACGTTGGCGGGCTGGCCCCCGCGCTGGCCCAGGCCGACGACGAGATCGAACTGGTGCTGC
TGTTCGGCCAGGGCGACGCGGTGCTCGAAAGCGTGGTGGACAACGCCAACTTCCTGCTCCACTGCACGCCGGCAATCAAC
CTGTTTCCGAAGCGCACCGACCGCATCCACGTCAACGACAGCGGCAACGAGTTCCACGTCGTCGCCGACCGCACGCGGCC
GATGGACTACGAAATCTACGAGCTGACCGAAGTGCTCGGTCACTTCCACGGCTCGCGCGACGAACAGCGCTTCCTGCCGT
TCTACGCCGACTTCCATTCCGGCACCGGGGACAGCCAGGCCTACTACAGCTGCCGGCGCGAACCGCGGCTGCTGTCGGAA
AAGCAGAAGAAGAACGGCCCGCGCACCGGCTATGTGGGCAGCGAAGTCTTCCTGTCGCTGGTCGACCCGCGCGAGGCGCC
CTACCGCGCCGACCTGCGCCAGCTGTCGATCCAGGCGCTGTGCACCAACCGCGACCTGCCCATCCTGCTGCCACAGGGTG
GTGGCCAGACCGACTTCTCGCTCGACATCGCCGCGCCGGTCGAGGCGATCCGCTGCGTGCGCGGCCCCTCGCGGCCCTAC
GGCATGCTGGCCGAAGGCGCCAGCGCATGGCGCCTGATCAGCCACCTGGCGCTCAACCACTTCTCGCTGGTGGATGCCGA
CGCGCACGAAGGCGCCGGCGCGCTGCGCGAAATGCTCGAACTCTACGCAACCAGCGCCGACGTCGGCATGCGGCGCCAGG
TGGAAGGGCTGAAGTCGGTCCGCGTGCTTCCCGTCGTCGCCCGCCTGCCCTTCCCCGGGCCGATCTGCTTCGGGCGCGGG
CTGGAGATCGCGCTGGAAGTGGACGAGACCGCGTTCGAGGGCGGCGGCGCCTTCGTGTTCGGCTCGGTCATGGAGCATTT
CCTCGCCCGCCACGCCTCGCTCAACAGCTTCACCCAGACCACGCTGCGCTCGCTCACGCGCGGGGTGGTCATGCGCTGGG
AGCCGCGATGCGGCAAGCGCACGATCCTGTAA

Protein sequence :
MDPRLLRYYNLELQHLREMGAEFARQFPKIAARLGMDGIEVADPYVERLLEGAGFLAARVQLKLDAEFPRFTQRLLEMLH
PHYLAPTPAMLVAQFRPVPGETNLARGFTLPRGTPFRSPLGKGDAAACEFRTAHEIRLWPLELVQARYFSFAADLPLARL
PLAGRVRGGVRLTLRTTGGLKFSQLSLDTLNLHLGGAQEVAYRLCELIGAASLGALVQPAGGKGGWQRFIPSEQIRLTGY
DDDQALLPTAHRSFGGYRLVQEYFSFPERFLFFDVGGLAPALAQADDEIELVLLFGQGDAVLESVVDNANFLLHCTPAIN
LFPKRTDRIHVNDSGNEFHVVADRTRPMDYEIYELTEVLGHFHGSRDEQRFLPFYADFHSGTGDSQAYYSCRREPRLLSE
KQKKNGPRTGYVGSEVFLSLVDPREAPYRADLRQLSIQALCTNRDLPILLPQGGGQTDFSLDIAAPVEAIRCVRGPSRPY
GMLAEGASAWRLISHLALNHFSLVDADAHEGAGALREMLELYATSADVGMRRQVEGLKSVRVLPVVARLPFPGPICFGRG
LEIALEVDETAFEGGGAFVFGSVMEHFLARHASLNSFTQTTLRSLTRGVVMRWEPRCGKRTIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0289 NP_454871.1 hypothetical protein Not tested SPI-6 Protein 4e-116 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sciC YP_935403.1 hypothetical protein VFG2074 Protein 1e-156 54