Gene Information

Name : qseB2 (azo3672)
Accession : YP_935174.1
Strain : Azoarcus sp. BH72
Genome accession: NC_008702
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4031270 - 4031950 bp
Length : 681 bp
Strand : +
Note : DNA-binding response regulator,; High confidence in function and specificity

DNA sequence : 
ATGCGCCTGCTGCTGATCGAAGACGACCCGATGATCGGGGCCGCCGTGCAACGCGGCCTGCGCCAGGACGGGTACGCCGT
GGACTGGGTGCGCGACGGCACCGCCGGCGTCCTGGCCCTGACCACCCCGGCCGCCGGAGGCGAAGCGCCCTACGACCTGC
TGCTGCTCGACCTCGGCCTGCCCGGCAAGGATGGACTGGCGGTGCTTGCCGAACTCCGGGGCGCCGCCAACACGGTGCCG
GTGCTGGTGCTGACCGCGCGCGACGCGGTGGCAGATCGCATCCGCGGCCTCGACGCCGGGGCCGACGACTATCTCGTCAA
GCCCTTCGACCTCGACGAACTCGGCGCCCGGGTGCGCGCGCTGCTGCGCCGGCGTGCCGGGCGCAGCGAACCGGTGGTGC
GGCAGGCCGGCCTGGTGGTCGATCCCGCCACCCACGCCGTCACCGTCGATGGCGCCCCGGTGCGGCTGTCCGCGCGCGAA
TTCGCGCTGCTGCAGGCCCTGCTCGAACACCCCGGCAAACCGCTGTCGCGCGCTCAGCTCGAAGAGCGCCTGTACGGATG
GGGCGAGGAGGTGGAAAGCAACGCGGTGGAGGTGCACATCCACGCCTTGCGGCGCAAGCTGGGCGCCGAGCGCATCCGCA
ACCTGCGCGGCGTCGGCTGGTTCGTCCCGGTGCAGGCATGA

Protein sequence : 
MRLLLIEDDPMIGAAVQRGLRQDGYAVDWVRDGTAGVLALTTPAAGGEAPYDLLLLDLGLPGKDGLAVLAELRGAANTVP
VLVLTARDAVADRIRGLDAGADDYLVKPFDLDELGARVRALLRRRAGRSEPVVRQAGLVVDPATHAVTVDGAPVRLSARE
FALLQALLEHPGKPLSRAQLEERLYGWGEEVESNAVEVHIHALRRKLGAERIRNLRGVGWFVPVQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 5e-27 46
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-18 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-18 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB2 YP_935174.1 DNA-binding response regulator BAC0487 Protein 1e-27 46
qseB2 YP_935174.1 DNA-binding response regulator BAC0197 Protein 3e-22 43
qseB2 YP_935174.1 DNA-binding response regulator BAC0083 Protein 4e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB2 YP_935174.1 DNA-binding response regulator VFG0473 Protein 9e-27 43
qseB2 YP_935174.1 DNA-binding response regulator VFG1389 Protein 2e-19 43
qseB2 YP_935174.1 DNA-binding response regulator VFG0596 Protein 7e-19 42