Gene Information

Name : sasR (azo3493)
Accession : YP_934995.1
Strain : Azoarcus sp. BH72
Genome accession: NC_008702
Putative virulence/resistance : Virulence
Product : sigma-54 dependent response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 3834272 - 3835684 bp
Length : 1413 bp
Strand : -
Note : Probable sigma-54 dependent response regulator,AAA_ATPase. IPR008931; FIS-like. IPR002197; HTH_Fis. IPR010114; NtrC. IPR001789; Response_reg. IPR008298; Res_reg_NtrC. IPR002078; Sig54_interact. Pfam: PF02954; HTH_8. PF00072; Response_reg. PF00158; Sigma54

DNA sequence : 
ATGCAGCACGAGACTGCAGCGGCGGCAGCCGGCGGCGACAGCGCAGAATTCAACTGGCAGGCCCATTCCATCCTCATCGT
CGATGACGAGGAAGGCATGCGCAACTTCCTCGAACGCACGCTGAAACGGCGTTGCGGGCTGGTCGAGGCCGCCGCCGGCG
TCGAGCAGGCGGAGGCGCTGATGGCCCGGCTGCACTTCGACCTGCTGGTGCTGGACATCGCGCTGCCGGGCAAATCGGGC
GTGCAATGGCTGCACGAACTGCGCGCTCACGGCTTCGCCGGCGACGTGATCCTGATCACCGCGTTTGCCGACATGGACAC
CGCGATCGGCGCGCTGCGCGCGGGGGCCTCGGACTTCATCCTGAAGCCCTTCCGCGTCGATCAGATCCTCAACTCGATCA
AGCGCTGCTTCGAACGCGCCGGGCTGGCGCGCGAGAATTTCGTGCTGCGCCGCGAACTCGCCGAACGCTCCACCGATCTC
CTCGGCCTCATCGGCCACTCGCCCGCGATCCAGCAGTTGCGGGGCCTGATCCGGCGCGTCGGGCAGATGCCGAGCACGGT
GCTGCTGCTGGGCGAATCCGGCACCGGCAAGGAGGTGGCGGCGCGCGCGCTGCACCAGATGAGCCCGCGCGCGCACCGGC
CCTTCGTGCCGCTCAACTGTGCCGCGATCGCGTCCGAGCTGATCGAGTCCGAGCTGTTCGGCCACGTCAAGGGCGCCTTC
ACCGGGGCCACCGAAACGCGCAACGGGCTGTTCTACTACGCCCACGGCGGCACGCTCTTCCTCGACGAGATCAGCGAACT
CCCGCTGGCCATGCAGACCCGCCTGCTGCGCGTGCTGGAAGAGCGCAAGCTGCGGCCGGTGGGCACCGAACGCGAGGTGC
CGGTCGATGTGCGCATCATCGCTGCGTCCAATCGCGACCTCGCCGCCGAAGTCGCCGCCGGCCGCTTCCGCCAGGACCTC
TATTTCCGCCTCGCGGTGGTGGAAATGCGGGTACCGGCGCTGCGCGAGCGGGTGGAGGACATCCCGGACCTGGTGAGCCA
CTTCATGACGCTGCTGTCGATGCAGCTCGGGGTGGCGCCGCTCCCGCTGTCGCACGAGCTGGTGACCCGGCTGGCGGCCT
ATCCGTGGCCGGGCAACGTGCGCGAACTGCGCAACCTGGTCGAGCGTTCGCTGATCCTCGGCGCCTTTCCCGCTGCCACC
GGCGCCTCCGCGCGGCGCGAACCGTCGCCTGCGGCACCGGGCGAACTCGAGCTGACGCTGGAAGAGGTGGAGAAGCGCCA
CATCCTGCGCGTGGTCGAAGCCTGCGCCGGCAACAAGGCAGAGGCCGCGCGCCGGCTGGCGGTATCGCGCAAGACCCTGG
ACCGCAAGTTCGCCGAATGGGGTGAGGCCGCAACCCCCGGCGGCGGCGACTGA

Protein sequence : 
MQHETAAAAAGGDSAEFNWQAHSILIVDDEEGMRNFLERTLKRRCGLVEAAAGVEQAEALMARLHFDLLVLDIALPGKSG
VQWLHELRAHGFAGDVILITAFADMDTAIGALRAGASDFILKPFRVDQILNSIKRCFERAGLARENFVLRRELAERSTDL
LGLIGHSPAIQQLRGLIRRVGQMPSTVLLLGESGTGKEVAARALHQMSPRAHRPFVPLNCAAIASELIESELFGHVKGAF
TGATETRNGLFYYAHGGTLFLDEISELPLAMQTRLLRVLEERKLRPVGTEREVPVDVRIIAASNRDLAAEVAAGRFRQDL
YFRLAVVEMRVPALRERVEDIPDLVSHFMTLLSMQLGVAPLPLSHELVTRLAAYPWPGNVRELRNLVERSLILGAFPAAT
GASARREPSPAAPGELELTLEEVEKRHILRVVEACAGNKAEAARRLAVSRKTLDRKFAEWGEAATPGGGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 6e-60 43
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 6e-60 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sasR YP_934995.1 sigma-54 dependent response regulator BAC0089 Protein 1e-67 45
sasR YP_934995.1 sigma-54 dependent response regulator BAC0467 Protein 1e-63 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sasR YP_934995.1 sigma-54 dependent response regulator VFG1214 Protein 7e-65 43
sasR YP_934995.1 sigma-54 dependent response regulator VFG1249 Protein 1e-54 43