Gene Information

Name : pilR (azo3356)
Accession : YP_934858.1
Strain : Azoarcus sp. BH72
Genome accession: NC_008702
Putative virulence/resistance : Virulence
Product : two component system response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 3691660 - 3693036 bp
Length : 1377 bp
Strand : -
Note : Two component system response regulator,; High confidence in function and specificity

DNA sequence : 
ATGAGCCACACCGAACGCCGCACGCGCCCCGCCACCAGCGAGGTGTTGGTCGTCGATGACGAGGAAGACATCCGCGAGCT
GATCGCGCTGTCACTGCTGCGGCTGGGGCTGGCCTGCGATACCGCCGGCACCGTGGCCGAAGCGCGGCAACTGCTCGATA
CCCGCCGCTATCGCCTGTGCCTTACCGACATGCGCCTGCCGGACGGCGACGGGCTGGAGATCGTGGAGACCATACAGGCG
CGCTGCCCCGGGCTGCCGGTCGCCGTCATCACCGCGTTCGGCAGCATCGACACCGCCATCCGCGCGCTCAAGCTCGGCGC
CTTCGACTTCGTCACCAAGCCGGTGGAGCTGAAGGTGCTGCGCGAACTGGTCACCCACGCGCTCAACCTCGATGCCCCCG
CCGCGCCCACGGAAGAAAGCGGCGGACGCCGCCTGATCGGCAACTCGGCCCCGATGGCCCATCTGCGCGCGCAGATCGCC
AAGCTCGCGCGCAATCAGGCGCCGGTGTTCATCCACGGCGAATCGGGCACCGGCAAGGAAGTCATCGCCAACCTGATACA
CGCCCAGGGCGGCCGCGCCGCTGCGCCCTTCGTGCCGGTCAACTGCGGCGCGATCTCGCCCGAGCTGATGGAGAGCGAGT
TCTTCGGCCACCGCAAGGGCAGCTTCACCGGCGCCAGTGCGGACAAGGAGGGTCTGTTCCAGGCGGCCAGCGGCGGCACG
CTGTTTCTGGACGAAGTGGGCGAGTTGCCGCTCGCAATGCAGGTGAAGCTGCTGCGCGCCATCCAGGAGCGCGCCGTGCG
CCCGGTCGGCGGCCATACCGAGGTGCCAGTGGATGTGCGCATCCTCTCCGCCTCCCACCGCGACCTCGCCCAGCTCGTCG
CCGAAGGCAAGTTCCGCCAGGACCTGTTCTTCCGCATCAACGTCATCACCTTGCGGGTGCCGCCACTGCGCGAACGCCCG
GAGGACGTCCCGGACCTCGCCGCCCACATCCTGCAGCGCCTCGCGCAGCGCGAGGCCACCGCCCCGCGCCGGCTGTCGCC
CGCCGCCCTGGCGCGCCTGCAGCAGTACCCCTTTCCCGGCAATGTGCGCGAACTCGAAAACCTGCTCGAGCGCGCCTGCG
CACTATGTGAAGGCGACGAGATCGGCGCGGAGGACGTGGACCTCTACCCCACCGAGTCGCTGACCCACTCGCAATTCAAC
TTCGACCCCATCCGCGACGCAGCGCCGGACGACACCGACGACGGCAGCGACGACGAGCGTATCCGCGTGCTGCGCGCGCT
CGACGAAACCCGCTGGAACCGCTCCGCCGCCGCCCGCAAGCTGGGGATGACGCTGCGGCAACTGCGCTATCGGCTGCAGA
AGTGGGGGATGGAGTAA

Protein sequence : 
MSHTERRTRPATSEVLVVDDEEDIRELIALSLLRLGLACDTAGTVAEARQLLDTRRYRLCLTDMRLPDGDGLEIVETIQA
RCPGLPVAVITAFGSIDTAIRALKLGAFDFVTKPVELKVLRELVTHALNLDAPAAPTEESGGRRLIGNSAPMAHLRAQIA
KLARNQAPVFIHGESGTGKEVIANLIHAQGGRAAAPFVPVNCGAISPELMESEFFGHRKGSFTGASADKEGLFQAASGGT
LFLDEVGELPLAMQVKLLRAIQERAVRPVGGHTEVPVDVRILSASHRDLAQLVAEGKFRQDLFFRINVITLRVPPLRERP
EDVPDLAAHILQRLAQREATAPRRLSPAALARLQQYPFPGNVRELENLLERACALCEGDEIGAEDVDLYPTESLTHSQFN
FDPIRDAAPDDTDDGSDDERIRVLRALDETRWNRSAAARKLGMTLRQLRYRLQKWGME

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 1e-92 49
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 1e-92 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pilR YP_934858.1 two component system response regulator BAC0467 Protein 9e-71 42
pilR YP_934858.1 two component system response regulator BAC0089 Protein 2e-64 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pilR YP_934858.1 two component system response regulator VFG1214 Protein 1e-118 60
pilR YP_934858.1 two component system response regulator VFG1249 Protein 9e-61 41
pilR YP_934858.1 two component system response regulator VFG0116 Protein 1e-58 41