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Name : pilB2 (azo3234) Accession : YP_934736.1 Strain : Azoarcus sp. BH72 Genome accession: NC_008702 Putative virulence/resistance : Virulence Product : pilus biogenesis protein Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3564593 - 3566311 bp Length : 1719 bp Strand : + Note : Pilus assembly protein PilB is a component of the pilus biogenesis apparatus,; High confidence in function and specificity DNA sequence : ATGGCAGCAAACCCCCAGGCCGCGCTGAGCGGGCTTGCCCGCGCACTAATCCAGCACGGTCGGCTTTCCGAAGCCGACGT TCTCTCCTGTTCACCCAAAAGTACAGGGTCGAGCAACAGCTTCCTGCTTGAGATCGTGCAACGCGGCCTGATGACTGCCC GCGACATCGCACGCTTTGCCGCCGAAACCTTCGGGTATCCGCTGTTCGACATCGCCGCCATTGACCGCGGTGCGATTCCC CGCGACGCGGTCGATCGCAAGCTGATGGGCAAGCACCAAGTGGTGGCGCTGGGCAAGCGTCAGAACCGCCTCACCCTCGC GGTCGCCGATCCGTCGAACATGCGCGTGCTCGACGAAATCCGGTTCCAGACCGGCATGCAGGTCGACCTCATCGTCGTCG AGGTCGACAAGCTCTGCAAACTCGCCGACTCCCTCGCTGAATCCACCGAGCAGACGCTGAAGGATCTGACCGGCGGCGAA GAGTTCGACATGGAGATGCTGCAGCAGGACGGCGGCACGGAGCAGTCCGCCGAGGACAGCACGGCGGAGGTCGACGACGC ACCGATCGTCAAGTTCATCCAGAAGGTTCTTGTTGACGCGATCAATGAAGGCGCGTCCGACATCCATTTCGAGCCCTACG AAAAGTACTACCGGATCCGCGTCCGTACTGACGGGATCTTGCGCGAGATTGCCCAGCCTCCCCTGGTGCTGAAGGAAAAG ATCGCAGCGCGGATCAAGGTCATCTCGCGCCTCGACATCTCCGAGAAGCGGATTCCGCAGGACGGCCGCATGAAGCTCGT CCTGTCAAAGACCAAGGCCATCGACTTCCGCGTATCCACGCTGCCGACGCTGCATGGCGAGAAGATCGTCATGCGTATTC TCGACCCCAGTTCGGCGATGCTCGGCGTGGATGCGCTGGGCTACGAGCCCGAGCAGAAGAAGGCGCTGCTGGATGCGGTG GAGCGTCCTTACGGCATGATCCTGGTCACGGGCCCCACGGGCTCGGGCAAGACGGTGTCGCTGTACACCTGCCTCAACCT GCTCAACAAGGCCGGCGTCAATATTTCCACCGCGGAGGACCCGGCCGAAATCAATCTGCCCGGCATCAACCAGGTCAACG TCAACGAGAAGGCGGGGCTCACCTTCGCCGCCTCGCTGCGCGCCTTCCTTCGCCAGGATCCGGACGTGATCATGGTCGGC GAAATCCGCGACCTGGAAACCGCTGAAATCTCCGTCAAGGCAGCACAAACCGGCCACCTCGTGCTCTCCACGCTGCACAC CAACGACGCCCCCACCACGCTCGAACGCCTGCGCAACATGGGGGTCGCGCCGTTCAACATCGCATCCTCGGTCATCATGA TCACCGCGCAACGGCTCGCGCGCCGCCTGTGCACCTGCAAGAAGCCCGTCGATATCCCGATCGAAGCCTTGCTTCAGGCC GGCTTCAAGGAACAGGATCTGGACGGCAGTTGGCAACCCTACGGCCCGGTCGGATGCGACCGCTGCAAGGGAAGCGGCTA CAAGGGCCGGGTGGGCATCTACCAGGTCATGCCGGTGTCCGAGGAGATCGCCCACATCATCATGACCAACGGCAACTCGA TGGACATCGCCGAGCAGGCGCGCCGCGAGGGCGTGAAGGATCTCCGCCAGTCCGGGCTTCTCAAGGTCAAGCAGGGCGTG ACGTCACTGGAAGAAGTGCTCGCCTCCACCAACGAATAG Protein sequence : MAANPQAALSGLARALIQHGRLSEADVLSCSPKSTGSSNSFLLEIVQRGLMTARDIARFAAETFGYPLFDIAAIDRGAIP RDAVDRKLMGKHQVVALGKRQNRLTLAVADPSNMRVLDEIRFQTGMQVDLIVVEVDKLCKLADSLAESTEQTLKDLTGGE EFDMEMLQQDGGTEQSAEDSTAEVDDAPIVKFIQKVLVDAINEGASDIHFEPYEKYYRIRVRTDGILREIAQPPLVLKEK IAARIKVISRLDISEKRIPQDGRMKLVLSKTKAIDFRVSTLPTLHGEKIVMRILDPSSAMLGVDALGYEPEQKKALLDAV ERPYGMILVTGPTGSGKTVSLYTCLNLLNKAGVNISTAEDPAEINLPGINQVNVNEKAGLTFAASLRAFLRQDPDVIMVG EIRDLETAEISVKAAQTGHLVLSTLHTNDAPTTLERLRNMGVAPFNIASSVIMITAQRLARRLCTCKKPVDIPIEALLQA GFKEQDLDGSWQPYGPVGCDRCKGSGYKGRVGIYQVMPVSEEIAHIIMTNGNSMDIAEQARREGVKDLRQSGLLKVKQGV TSLEEVLASTNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 9e-77 | 42 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 7e-77 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilB2 | YP_934736.1 | pilus biogenesis protein | VFG0112 | Protein | 7e-150 | 56 |
| pilB2 | YP_934736.1 | pilus biogenesis protein | VFG1880 | Protein | 3e-140 | 55 |
| pilB2 | YP_934736.1 | pilus biogenesis protein | VFG0233 | Protein | 7e-139 | 53 |
| pilB2 | YP_934736.1 | pilus biogenesis protein | VFG1876 | Protein | 2e-78 | 46 |
| pilB2 | YP_934736.1 | pilus biogenesis protein | VFG0182 | Protein | 1e-78 | 46 |
| pilB2 | YP_934736.1 | pilus biogenesis protein | VFG2048 | Protein | 2e-77 | 42 |
