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Name : xerD (azo3219) Accession : YP_934721.1 Strain : Azoarcus sp. BH72 Genome accession: NC_008702 Putative virulence/resistance : Unknown Product : integrase/recombinase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 3550691 - 3551608 bp Length : 918 bp Strand : + Note : Tyrosine recombinase xerD. Site-specific tyrosine recombinase which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit the DNA sequence : GTGACCGCATTCGAACAACAGCTCTCGGCCGAGACGCGCGCCGAACTCGATCTGTTCTGCGACGCACTGTGGCTGGAATT CGGCCTGGCAGCCAATACCATTGCCGGTTATCGGAGCGATCTCGCGCAATTCGGCGCCTGGCTGGCCAGCCGCGGGACTC AATTGATCGAAGCGGACGAGAGCCAGCTCACCGCGTATCTCGCCGAATTCAGCCGCCGCGCCAAACCCGCCAGCCAGCGC CGCCTGATGTCGGCCTGGCGCCGCTTTTACCGAGGGCTGCTCGGCCAGCGCCGTATCGCTCAGGATCCGACCGTCCAGCT CGACGCCCCGGTGACCGGCGAACGCTTTCCCCGCACCCTCAGCGAAGCACAGGTGGAATCGCTGCTGGCAGCGCCCGACG TCGACACGATTCACGGCCTGCGGGACCGCAGCATGCTTGAATTGCTGTATGCGAGCGGGCTTCGTGTTTCCGAGCTGGTG GAATTGAAACTCTTTGCGATCAGCACCGGCGAAGGCGTAATCCGCGTGTTCGGCAAAGGCAGCAAGGAACGCCTCGTTCC CACCGGCGACATCGCGCTCGAGTGGCTCGGCCGCTACCTGCGCGAAGCGCGGCCAGCCCTGTTGCGCGGGCGGACATGCG ACGAGGTTTTCGTTTCCCAGCGCGGCGCCGGAATGACGCGCCAGATGTTCTGGCGCATCATCAAGCAATACGCACCCAAG GCAGGAATTCCAGCACAACGGATCTCGCCCCACACGCTGCGACACGCATTTGCCACGCACCTGATCAATCACGGCGCAGA CCTCCGCGTCGTGCAATTGCTGCTGGGCCACGCCGATATCTCGACGACGCAAATCTACACGCATGTGGCGCGGGAACGCT TGAAGCAGCTCCACGCCAGACACCATCCGCGCAGCTAA Protein sequence : MTAFEQQLSAETRAELDLFCDALWLEFGLAANTIAGYRSDLAQFGAWLASRGTQLIEADESQLTAYLAEFSRRAKPASQR RLMSAWRRFYRGLLGQRRIAQDPTVQLDAPVTGERFPRTLSEAQVESLLAAPDVDTIHGLRDRSMLELLYASGLRVSELV ELKLFAISTGEGVIRVFGKGSKERLVPTGDIALEWLGRYLREARPALLRGRTCDEVFVSQRGAGMTRQMFWRIIKQYAPK AGIPAQRISPHTLRHAFATHLINHGADLRVVQLLLGHADISTTQIYTHVARERLKQLHARHHPRS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 1e-56 | 50 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 1e-56 | 50 |
