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Name : thmS2 (azo3021) Accession : YP_934524.1 Strain : Azoarcus sp. BH72 Genome accession: NC_008702 Putative virulence/resistance : Unknown Product : succinate semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 3319525 - 3320985 bp Length : 1461 bp Strand : + Note : Probable succinate semialdehyde dehydrogenase [NAD(P)+]. Homology to thmS of Pseudonocardia sp. K1 of 46% (trembl|Q9F3V7). Is capable of oxidizing substrates using NADP as cofactor. Pfam: Aldehyde dehydrogenase family no signal peptide no TMHs; Family mem DNA sequence : ATGTCCGCACCCACCTCCTACCCCAGCCGCAACTTCATCGCCGGCGAGTGGCGCGCCGCCATCTCCGGCGCCACCTTCGC CAAGCTCGCCCCGACCTCCGGCGCGGTGCTGGCCGAGGTCGCCAACTCCAGCGCCGCCGATGTGGATGCGGCGGTGGCCG CCGCCCGCGTCCAGTTCGACGGCGGCGAGTGGTCACGCCTGCCAGGCGCCGAACGCGGCCGCCTGCTCAACAAGCTGGCC GACCTGCTGGCGCGCGACGCCGAGCGCTTCGCCCACATCCTGGCGATGGAACAGGGCCGGCCGCTGATGGAAATGCGCAT GCTGGACCTGCCGATGTCCATCGACACCCTGCGCTACTTCGCCGGCTGGGCCGACAAGCTGGAAGGCCGCCAGATTCCCA CCGCCGGCTTCATGGGCCGGCCGACGCTCAACTACACCATTCGCGAGGCCATCGGCGTGGCCGCGCTGATCGTGCCGTGG AACGCGCCGCTGATGATCGGCATCTGGAAGCTGGCCCCGGCGCTGGCCGCCGGCTGCACCGTGGTGCTCAAGCCTTCTGA AGACGCGCCGCTGGCGCTCACCGCGCTGGCCGGGCTGGCCGCAGAGGCCGGTTTCCCGGCCGGCGTGTTCAACCTGGTGA ATGGCATGGGCCCGGAGGCCGGCGCCACGCTGGTGAAGCACCCCGGCGTGGACAAGATCAGCTTCACCGGCAGCACCGAG GTGGGCCGCATCATCGCCCGCGAGGCGGCGCCGCTGTTCAAGCGCCTGACGCTGGAGCTGGGCGGCAAGGCGCCGCAGAT CATCTGCGCCGACGCCAACCTGGACGCCGCCATCATGGGCGTCGCCATGGGCCTGTTCGTGAACCAGGGCCAGACCTGCG CCGCCGGCACCCGCATCCTGGTGCATCGCAGCCGCTACGACGACGTGGTCGGCGCACTCGCCGGCGCGGCCAAGTCGGTC ACGCTGGGCGACCCGCTGGACGCCAACACCCGCATGGGCGCCCTGATCAACGCCCGCCACCGCGACCGCGTCGCCGCCCT GATCCAGAGCGGCATCGCCGAAGGCGCCGCGCTGGTGGCCGGCGGCGAGGCGCTGCCCGAGAACGGCTTCTTCGTCCGCC CCACGGTGTTCGCCGGCGGCACGCCGCAGATGCGCATCATGCGCGAGGAGATCTTCGGCCCGGTCGGCGTGGTGGTGCCC TTCGACAGCGACGAGGAAGCCGTGCAACTCGCCAACGACACCCCCTTCGGCCTCTCCGCCTCGCTGTGGACGCAGGACAT CGCCCGTGCGCACACGCTGGCGCCCAAGCTGCGCGTCGGCGCGGTCGCCATCAACGGCTGGAGCCCGCTCGACGCGCGCC TGCCGTGGGGCGGCTACAAGGATTCCGGCGTGGGGCGCGATCTGTCTCGTACCGCGCTGGATGCTTATACGGAAGAGAAG GTGGTGTCGGTGGTGATGTGA Protein sequence : MSAPTSYPSRNFIAGEWRAAISGATFAKLAPTSGAVLAEVANSSAADVDAAVAAARVQFDGGEWSRLPGAERGRLLNKLA DLLARDAERFAHILAMEQGRPLMEMRMLDLPMSIDTLRYFAGWADKLEGRQIPTAGFMGRPTLNYTIREAIGVAALIVPW NAPLMIGIWKLAPALAAGCTVVLKPSEDAPLALTALAGLAAEAGFPAGVFNLVNGMGPEAGATLVKHPGVDKISFTGSTE VGRIIAREAAPLFKRLTLELGGKAPQIICADANLDAAIMGVAMGLFVNQGQTCAAGTRILVHRSRYDDVVGALAGAAKSV TLGDPLDANTRMGALINARHRDRVAALIQSGIAEGAALVAGGEALPENGFFVRPTVFAGGTPQMRIMREEIFGPVGVVVP FDSDEEAVQLANDTPFGLSASLWTQDIARAHTLAPKLRVGAVAINGWSPLDARLPWGGYKDSGVGRDLSRTALDAYTEEK VVSVVM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 2e-60 | 43 |
