Gene Information

Name : ribD (azo2803)
Accession : YP_934306.1
Strain : Azoarcus sp. BH72
Genome accession: NC_008702
Putative virulence/resistance : Unknown
Product : AMP deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 3.5.4.26
Position : 3086189 - 3087280 bp
Length : 1092 bp
Strand : +
Note : Riboflavin biosynthesis protein ribD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) (Riboflavin-specific deaminase); 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) (HTP reductase)]. CONVERTS 25-DIAMINO-6-(

DNA sequence :
ATGACCTTTTCGGCGGCTGATCACGCCGCCATGGCGCGCGCGCTCGCGCTCGCTGCCAACGGCCTCTGTACCACCACCCC
CAATCCGCGCGTCGGCTGCGTGCTGGTACGCGACGGTGAGATCGTCGGCGAAGGCTGGCACCAGCGTGCCGGCGAAGCCC
ATGCCGAGGTCCATGCCCTGCGCGCCGCCGGCGAGCGTGCGGCAGGCGCCACGGCCTACGTCACGCTCGAACCCTGCTCC
CACTTCGGCCGCACCCCGCCGTGCTGCGAGGCGCTGGTCGCAGCCGGCGTCCGCCGCGTCGTCGCGGCCATGGAAGACCC
CAACCCGCTGGTCGCCGGCAGCGGCCTCGCGCGACTGCGCGCAGCCGGCATCGACACCGCCCACGGCCTGCTCGAAAGCG
AGGCGCGCGAACTCAACATCGGCTTCATCTCGCGCATGACCCGCGGTCGTCCCTGGGTGCGGCTGAAAGCGGCGGCGACG
CTCGACGGCAAGACCGCACTCGCCAATGGGGTCAGCCAGTGGATTACCGGGGAAGCCGCGCGCAGCGACGGCCATCGCTG
GCGCGCGCGCGCCTGCGCGATCCTGACCGGGATCGGCACCGTGCGCGAAGACGATCCCCAACTCACGGTGCGCGGGGTTC
CGTGCGAACGCCAGCCGCTACGCGTCGTGGTGGATGCACGGCTCGAGATCGGGCGCGAAGCGCGCATCCTGCAGGGCGCG
CCCGTCCTCATTGCCACGGCCATCGAAGAAGGCGAGCGCGCGGCGGAACTGCGCGCCGCCGGCCACGAAGTGCTGTCGCT
CGCCAACGAGGCGGGCAAGGTTGCGCTGCCCGCGCTGCTGCAGGCGCTGGCAGCACGCGGCATCAACGAACTGCACGTCG
AGGCCGGCTTCAAACTCAACGGCTCGTTGCTGCGCGAAGGGTGCGTGGACGAACTGTTGCTGTATATGGCGCCGATGCTG
GTCGGGGACAGTGCGCAGGGCATGTTCAACCTGAGCGCACTGACTTCGCTGGATCAGGCCCTGCGGCTCGACATCCGGGA
TATGCGCCGGATCGGCGAAGACTTCCGCGTCCTGGCCCGCCTGCGCGCTTAG

Protein sequence :
MTFSAADHAAMARALALAANGLCTTTPNPRVGCVLVRDGEIVGEGWHQRAGEAHAEVHALRAAGERAAGATAYVTLEPCS
HFGRTPPCCEALVAAGVRRVVAAMEDPNPLVAGSGLARLRAAGIDTAHGLLESEARELNIGFISRMTRGRPWVRLKAAAT
LDGKTALANGVSQWITGEAARSDGHRWRARACAILTGIGTVREDDPQLTVRGVPCERQPLRVVVDARLEIGREARILQGA
PVLIATAIEEGERAAELRAAGHEVLSLANEAGKVALPALLQALAARGINELHVEAGFKLNGSLLREGCVDELLLYMAPML
VGDSAQGMFNLSALTSLDQALRLDIRDMRRIGEDFRVLARLRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-46 46
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-46 46