|
Name : azo2052 (azo2052) Accession : YP_933556.1 Strain : Azoarcus sp. BH72 Genome accession: NC_008702 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 2251818 - 2254355 bp Length : 2538 bp Strand : + Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGCAGCAATACCTGCGCATCAAGGAGCAGCACCCCGATACGCTGCTGTTCTACCGGATGGGCGACTTCTATGAACTGTT CTTCGAGGACGCCGAGAAGGCCGCCCGTCTGCTCGACATCACGCTGACCACGCGAGGCCAGTCAGCCGGGATGCCGATCC GGATGGCGGGCGTTCCGTTCCATGCTGTCGAACAGTACCTCGCAAGGCTGGTGAAGCTCGGCGAATCGGTGGTGATCGCC GAACAAGTGGGCGAGCCGGGCGCCACCAAGGGGCCGATGGAACGCGCGGTCAGCCGGATCGTCACGCCGGGTACGCTCAC CGACGCGGCTTTGCTCGATGACCGTCGCGATGCGCTGCTGCTGGCGGCCAACATGCACCGCGGTGTGCTGGGCATGGCCT GGCTCAACCTTGCCAACGGCGAATTCCGCTTGATGGAATGCCCGGCAGAATCACTGCAGGCCCAGTTCGAGCGCCTGCGG CCGGCGGAAGTCCTCATTCCGGACGGCCTGGCGTTGCCACTGATGGAAACGCTGGCCCCCGCGTTGCGGCGGCTGGCGGA CTGGCAGTTCGACGCCGACACGGCACACCGGCTGCTCACAACTCACTTCGGCACCCGCGATCTCGCCGGTTTCGGCGTAG AGGAAGCGCCGGTGGCGCTGGGCGCCGCGGCCGCGCTGTATGACTACGCCAAGGCCACCCAGCGCCAGAGCCTGGCCCAT CTCACGGGCCTTAGGCTGGAGCGCGAGGCAGAGTTCCTGCGGCTGGACGCAGCGACCCGCCGCAATCTCGAACTGACCGA AACACTGCGTGGCGAGCCGTCACCCACACTGCTGTCCTTGCTGGATACCTGCATGACGAGCATGGGGTCGCGCTGGCTTC GCCATGCGCTCCATCACCCCTTGCGCGACCGCACGATTCCGGCTGCACGGCAGCAGGCGGTTGCCGCGCTGGTGGGCGAT GGCGACGGTCTGCATGCCCAGGCGGTCCGTGGGGCCCTGCGTGGTGTGGCGGACGTGGATCGCATTACCGGCCGGATTGC CCTCCGCAACGCGCGCCCGCGCGATCTGTCCGCTCTGCGCGAAAGCCTGAGCCGCCTGCCCGAGTTACGTCAGACCCTGG CTCAGATCGGTGACGAGGGCATGGTCGGCGGGTTGGCCGCGGCGCTGGATGTCCAGCCCGAGTTGCTTCAATGTCTGCAG CGCGCAATTGCCGACGAGCCTGCGGCCATGGTGCGCGACGGCGGCGTCATCGCCGCAGGATACGACGCGGAACTGGACGA ACTGCGCGGCATCCAGACCAATTGCGGCGAGTTCCTGATGGCCCTGGAGGCGCGGGAGCGCGAGCGCAGCGGCATTGCGA ACCTGAAGGTCGAGTTCAACAAGGTGCACGGCTTCTACATTGAGGTCAGCCACGCCAATGCCGACAAGGTGCCGGATGAC TACCGCCGGCGCCAGACACTGAAGAACGTCGAGCGCTATATCACGCCGGAACTGAAAGCCTTTGAAGACAAGGCGCTCTC TGCCCAGGAGCGTGCGCTGGCGCGGGAAAAGGCCCTGTACGAAGCACTGCTCGATGCGCTCTCGCCCTACATCCCCGCCC TGCAAGGATGTGCCCGTGCGCTGGCCACGCTTGACGGCCTGGCGGCGTTCGCGGAAGCCGCGCTGCGCTACGGTTACGTC CGCCCGGTGTTCAGCGACCAACCCGGCATCGAGATCCGGGGCGGCCGCCATCCGGTGGTGGAGCGCCAGGTCGAGGATTT CATCCAGAACGACGCGCGCCTCGGTTCGACGCGCAGGATGCTGATGATCACCGGCCCCAACATGGGTGGTAAATCCACCT TCATGCGGCAGGTGGCGTTGATCTGCCTGCTCGCCCACGTCGGCAGTTTCGTCCCGGCGCAGAGCGCGGTACTGGGGCCG CTGGATGCGATTTTCACCCGTATCGGCGCATCCGATGACCTCGCCTCCGGCCGATCGACCTTCATGGTGGAGATGACGGA GGCCTCGGCCATCCTGCACGGCGCCACCGAACACAGCCTGGTGCTGATGGACGAGATCGGGCGCGGCACCTCCACCTTTG ATGGCTTGGCGCTCGCGTTCGCGATCGCCCGCCATTTGCTCGAAAAGAACCGCAGCCTGACCCTTTTCGCAACCCACTAC TTCGAGCTGACCCGCCTTAACGGCGAGTACCCGGAGTGCGCCAATGTCCATCTGGATGCAGTGGAGCATGGCCACCGCAT CGTCTTCCTTCACGCGCTGGAAGACGGACCCGCGAGCCAGAGCTACGGGATCGAGGTGGCGGCGCTGGCCGGAATTCCGG CGCCGGTCATCCGCGACGCAAAACGACGCCTGCGCGCGCTGGAGAATCGCGAGGTCGGCGCCGGACCCCAGGCCGACCTC TTCGCCGCCCTGCCCGACGACGACGACGCGCCGCTCTCGCACCCGGTGCTGATTGCACTGGCGGAGATCGATCCCGACAG CCTGAGTCCGCGTGAAGCCCTGGAACGCCTGTACGCCTTGAAGCGCCTGAGTGCATGA Protein sequence : MQQYLRIKEQHPDTLLFYRMGDFYELFFEDAEKAARLLDITLTTRGQSAGMPIRMAGVPFHAVEQYLARLVKLGESVVIA EQVGEPGATKGPMERAVSRIVTPGTLTDAALLDDRRDALLLAANMHRGVLGMAWLNLANGEFRLMECPAESLQAQFERLR PAEVLIPDGLALPLMETLAPALRRLADWQFDADTAHRLLTTHFGTRDLAGFGVEEAPVALGAAAALYDYAKATQRQSLAH LTGLRLEREAEFLRLDAATRRNLELTETLRGEPSPTLLSLLDTCMTSMGSRWLRHALHHPLRDRTIPAARQQAVAALVGD GDGLHAQAVRGALRGVADVDRITGRIALRNARPRDLSALRESLSRLPELRQTLAQIGDEGMVGGLAAALDVQPELLQCLQ RAIADEPAAMVRDGGVIAAGYDAELDELRGIQTNCGEFLMALEARERERSGIANLKVEFNKVHGFYIEVSHANADKVPDD YRRRQTLKNVERYITPELKAFEDKALSAQERALAREKALYEALLDALSPYIPALQGCARALATLDGLAAFAEAALRYGYV RPVFSDQPGIEIRGGRHPVVERQVEDFIQNDARLGSTRRMLMITGPNMGGKSTFMRQVALICLLAHVGSFVPAQSAVLGP LDAIFTRIGASDDLASGRSTFMVEMTEASAILHGATEHSLVLMDEIGRGTSTFDGLALAFAIARHLLEKNRSLTLFATHY FELTRLNGEYPECANVHLDAVEHGHRIVFLHALEDGPASQSYGIEVAALAGIPAPVIRDAKRRLRALENREVGAGPQADL FAALPDDDDAPLSHPVLIALAEIDPDSLSPREALERLYALKRLSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 6e-172 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| azo2052 | YP_933556.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 52 |
