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Name : gabD2 (azo1920) Accession : YP_933424.1 Strain : Azoarcus sp. BH72 Genome accession: NC_008702 Putative virulence/resistance : Unknown Product : succinate semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 2107621 - 2109078 bp Length : 1458 bp Strand : - Note : Probable succinate-semialdehyde dehydrogenase [NAD(P)+]. Homology to gabD of P. aeruginosa of 62% (trembl|Q9RBF6) Catalysis of the reaction: succinate semialdehyde + NAD(P)+ + H2O = succinate + NAD(P)H + H+. Pfam: Aldehyde dehydrogenase family no signal p DNA sequence : ATGCAACTCAAGGATCAATCCCTGCTGCTCGACGCCGCCTTCATCGACGGCGAGTGGATCGCGGCCGACGACGGCGCCCG CTTCGATGTGCGCAACCCTGCCGATGGCAGCCTGGTGGCGACGGTGCCGGACATGGGTGCGGCGGAAACGCGACGCGCCA TCGCCGCCGCCGACGCCGCGCTGCCCGCCTGGCGCGCGCGCACTGCCAAGGACCGCGCACTCATCCTGCGCAAGTGGTTC GACCTGATCCTCGCTCATCAGGAAGACCTGGCTCAGCTGATGACCGCGGAGCAGGGCAAGCCGCTGGCCGAAGCGCGCGG CGAAGTGGCCTACGGTGCCTCCTTCATCGAATGGTTCGCCGAAGAAGCCAAGCGCATCTACGGCGACGTCATCCCCGGCC ACGGTCCCGACAAGCGCATCATCGTGATCAAGCAGCCGATCGGCGTGGTGGCCGCGATCACCCCGTGGAATTTCCCGATC GCGATGATCACGCGCAAATGCGGGCCGGCACTCGCGGCGGGGTGCACCGTGGTGGTCAAACCCGCGGAGGACACGCCGCT GTGTGCGCTCGCGATCGCGGAACTCGGCCGCCGCGCCGGGCTGCCCGCCGGCGTGCTCAACGTGGTGACCACTTCCCGCG CGCCGGAGGTCGGCACCGAACTCGCCACCAACCCGATCGTGAGGAAGCTCTCCTTCACCGGCTCGACCGCGGTCGGCAAG CTGTTGATGGCGCAATGCGCCGGCACGGTGAAGAAGGTTTCGCTGGAACTCGGCGGCAACGCGCCTTTCATCGTGTTCGA CGACGCAGACCTCGACGCAGCAGTCGCGGGCGCGATCGCCTCCAAGTACCGCAACGCCGGGCAAACCTGCGTGTGCGCCA ACCGCCTGCTGGTGCAGGACGGCATCTACGAGGCCTTCGCGGCCAGGCTGGCCGAGGCGGTGGCGAAGATGAAAGTCGGC CCCGGCGTCGAAGCCGACGTGCAGCAGGGACCGCTGATCAACGACAAGGCCGTGGCCAAGGTGGAAGAACTGCTCGCCGA CGCCACCGCAAAAGGCGCGCAGGTGGTGCTCGGCGGTGAACGCCACGCGCTCGGCCACGGCTTCTTCCAGCCCACGGTGC TGACCGGCGTGACCCCGGCGATGCGGCTCGCGCGCGAGGAGATCTTCGGGCCGGTCGCGCCGCTGTTCCGCTTTTCCACC GAGGACGAGGCGGTACGACTGGCCAACGACACGGAATACGGCCTCGCCGCCTACTTCTACGCCGGCAACATCGCGCGCGT CTGGCGCGTGGCCGAACGGCTGGACTACGGCATCGTCGGCATCAACGAGGGCATCATCTCGACCGAGGTCGCGCCGTTCG GCGGGGTCAAGGAGTCCGGCATCGGGCGCGAGGGGTCGAAGTACGGCATCGAGGACTACGTCGAGATCAAATACCTTTGC CTCGGCGGCATCCGCTGA Protein sequence : MQLKDQSLLLDAAFIDGEWIAADDGARFDVRNPADGSLVATVPDMGAAETRRAIAAADAALPAWRARTAKDRALILRKWF DLILAHQEDLAQLMTAEQGKPLAEARGEVAYGASFIEWFAEEAKRIYGDVIPGHGPDKRIIVIKQPIGVVAAITPWNFPI AMITRKCGPALAAGCTVVVKPAEDTPLCALAIAELGRRAGLPAGVLNVVTTSRAPEVGTELATNPIVRKLSFTGSTAVGK LLMAQCAGTVKKVSLELGGNAPFIVFDDADLDAAVAGAIASKYRNAGQTCVCANRLLVQDGIYEAFAARLAEAVAKMKVG PGVEADVQQGPLINDKAVAKVEELLADATAKGAQVVLGGERHALGHGFFQPTVLTGVTPAMRLAREEIFGPVAPLFRFST EDEAVRLANDTEYGLAAYFYAGNIARVWRVAERLDYGIVGINEGIISTEVAPFGGVKESGIGREGSKYGIEDYVEIKYLC LGGIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 4e-139 | 67 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 3e-76 | 42 |
