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Name : clpB1 (azo1566) Accession : YP_933070.1 Strain : Azoarcus sp. BH72 Genome accession: NC_008702 Putative virulence/resistance : Unknown Product : ATP-dependent Clp protease ATP-binding subunit ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1718010 - 1720592 bp Length : 2583 bp Strand : + Note : Probable ATP-dependent Clp protease, ATP-binding subunit ClpB. Homology to clpB of E. coli of 66% (sprot|CLPB_ECOLI). The protein is thought to be subunits of ATP-dependent proteases which act as chaperones to target the proteases to substrates. Pfam: ATP DNA sequence : ATGCGTTTCGACAAGCTCACCACCAAATTCCAGCAAGCCCTCGCGGATGCCCAGAGCATCGCGGTGGGCAACGACCAGCA GTTCATCGAGCCGCAGCACCTGCTCGCGGCGATGCTCAACCAGGACGACGGCGGCACGGTGTCGCTGTTGCAGCGCGCCG GCGTCAATGTGCCGCCGCTGAAATCCGCGCTGCAGAAGGCGCTCGACCGCCTGCCCAAGGTGGAAGGCCATGGCGGCGAG GTGCAGGTCGGCCGCGACCTCACCAACCTGCTCAACCTCACCGACAAGGAAGCCCAGAAGCGCGGCGACCAGTTCATCGC CAGCGAGATGTTCCTGCTCGCGCTCGCCGACGACAAGGGCGAGACCGGCCGTCTGCTGAAGGAGCACGGCCTCACCCGCA AGGCGCTGGAGGCGGCCGTGGATGCGGTGCGCGGCGGCCAGAACGTGGGCAGCCAGGATGCCGAAGGCCAGCGCGAGGCG CTGAAGAAGTACTGCCTGGACCTCACCGAGCGCGCCCGCGCCGGCAAGCTCGACCCGGTGATCGGCCGTGACGACGAGAT CCGCCGCGCGATCCAGATCCTGCAGCGCCGCACCAAGAACAACCCGGTGCTGATCGGCGAGCCCGGCGTGGGCAAGACCG CCATCGTCGAGGGCCTGGCGCAGCGCATCGTCAATGACGAGGTGCCGGAGACGCTCAAGGGCAAGAAGGTGCTGTCGCTC GACATGGCGGCGCTGCTGGCCGGCGCCAAGTACCGCGGCGAGTTCGAGGAGCGGCTGAAGGCGGTGCTGAAGGACATCGC CCAGGACGAGGGCCGCATCATCCTCTTCATCGACGAGATCCACACCATGGTGGGCGCCGGCAAGGCCGAAGGCGCGATGG ACGCCGGCAACATGCTGAAGCCGGCGCTGGCGCGCGGCGAGCTGCACTGCATCGGCGCCACCACGCTGGACGAGTACCGC AAGTACATCGAGAAGGATGCCGCGCTCGAACGCCGCTTCCAGAAGGTGCTGGTGGACGAGCCGACGGTGGAATCCACCAT CGCCATCCTGCGCGGTCTGCAGGAGAAGTACGAGGTGCACCACGGCGTGGACATCACCGACCCGGCCATCGTCGCCGCGG CGGAACTCTCGCACCGCTACATCACCGACCGCTTCCTGCCGGACAAGGCGATCGACCTGATCGACGAGGCCGCGGCGCGC ATCAAGATGGAGATCGACTCCAAGCCGGAGGTCATGGACAAGCTCGAACGCCGGCTGATCCAGCTCAAGATCGAGCAGGA GGCGGTCAAGCGCGAGACCGACGAGGCGTCGCAGCGACGCCTGCTGCTGATCCGCGACGAGATCGACAAGCTCGAACGCG AGTACGCCAACCTGGACGAGGTCTGGCGTTCGGAAAAGGCCAGCGTGCAGGGCAGCCAGCACATCAAGGAAGAGATCGAG AAGCTGCGCGCGCAGATGGCCGAGATGCAGCGCAAGGGCCAGTTCGACAAGCTCGCCGAGCTGCAGTACGGCAAGCTGCC GCAGCTGGAAGCCCAGCTGAAGGCGGCCGAAACCGCCGGCAGCGGCGAGCGCCAGTTCAAGCTCTTGCGCACCCAGGTGG GCGCCGAGGAAATCGCCGAGGTGGTGTCTCGCGCCACCGGCATTCCGGTGAGCAAGATGATGCAGGGCGAGCGCGACAAG CTCCTGAAGATGGAAGAGCGGCTGCACGGCCGCGTGGTGGGCCAGGACGAAGCGGTGCGGCTGGTGTCGGACGCGATCCG GCGTTCGCGCGCGGGGCTGGCCGACGAGAACCGGCCCTACGGCTCCTTCCTCTTCCTCGGCCCCACCGGCGTGGGCAAGA CCGAGCTGTGCAAGACGCTGGCCGAATTCCTGTTCGATTCGGAAGAGCACCTGATCCGGATCGACATGAGCGAGTTCATG GAGAAGCACTCGGTCGCCCGCCTGATCGGCGCGCCCCCGGGCTATGTCGGCTACGAAGAAGGCGGCTACCTGACCGAGCA GGTGCGGCGCAAGCCCTACAGCGTCATCCTGTTCGACGAGGTCGAGAAGGCACATCCGGATGTGTTCAACGTGCTGCTGC AGGTGCTCGACGACGGCCGCATGACCGACGGCCAGGGCCGCACGGTGGACTTCAAGAACACCGTGATCGTGATGACCAGC AACCTCGGCAGCCAGATGATCCAGCAGATGTCGGGCGACGATTACCAGGTGATCAAGCTGGCGGTGATGGCCGAGGTGAA GACCTTCTTCCGCCCCGAGTTCATCAACCGCATCGACGAGGTGGTGGTGTTCCATGCGCTCGACGAGAAGAACATCGCCG GTATCGCGCGCATCCAGCTGAAGTACCTGGAGAAGCGCCTGGCCAAGCTCGACATGAGCATGGAGGTGAGCGACGCGGCG CTGGCCGAGATCGCCTCGGCCGGTTTCGATCCGGTGTTCGGCGCGCGGCCGCTGAAGCGTGCGATCCAGGAGCGCATCGA GAATCCGCTGGCGAAGGCGATTCTCGAAGGGCAGTTCGGCGCCAAGGACCGCATCCGGGTCGACGCCAGCGGCAGCAAGC TGAGCTTCAGCCGGGCTGACTGA Protein sequence : MRFDKLTTKFQQALADAQSIAVGNDQQFIEPQHLLAAMLNQDDGGTVSLLQRAGVNVPPLKSALQKALDRLPKVEGHGGE VQVGRDLTNLLNLTDKEAQKRGDQFIASEMFLLALADDKGETGRLLKEHGLTRKALEAAVDAVRGGQNVGSQDAEGQREA LKKYCLDLTERARAGKLDPVIGRDDEIRRAIQILQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNDEVPETLKGKKVLSL DMAALLAGAKYRGEFEERLKAVLKDIAQDEGRIILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYR KYIEKDAALERRFQKVLVDEPTVESTIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR IKMEIDSKPEVMDKLERRLIQLKIEQEAVKRETDEASQRRLLLIRDEIDKLEREYANLDEVWRSEKASVQGSQHIKEEIE KLRAQMAEMQRKGQFDKLAELQYGKLPQLEAQLKAAETAGSGERQFKLLRTQVGAEEIAEVVSRATGIPVSKMMQGERDK LLKMEERLHGRVVGQDEAVRLVSDAIRRSRAGLADENRPYGSFLFLGPTGVGKTELCKTLAEFLFDSEEHLIRIDMSEFM EKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILFDEVEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTS NLGSQMIQQMSGDDYQVIKLAVMAEVKTFFRPEFINRIDEVVVFHALDEKNIAGIARIQLKYLEKRLAKLDMSMEVSDAA LAEIASAGFDPVFGARPLKRAIQERIENPLAKAILEGQFGAKDRIRVDASGSKLSFSRAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 6e-107 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 1e-99 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 9e-100 | 41 |
