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Name : lysS (azo1487) Accession : YP_932991.1 Strain : Azoarcus sp. BH72 Genome accession: NC_008702 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 1624335 - 1625837 bp Length : 1503 bp Strand : - Note : class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA DNA sequence : ATGTCCGACCATAACGCCACCCCTGCCGCCCAGGACGAAAACCACATCATCGCGGAGCGCCGCGAAAAACTCGCCCAATG GCGCCAGGCAGGCCGGGCCTTCCCCAACGACTTCTCGCGCGAGAACACCGCCGGCAAGCTCGACGAGGTGTATGGCGACA AAGAGCCGGAAGCGCTGGAAGCCAGCCCGGTGGAAGTCCGCGTAGCGGGCCGCGTGATGCTCAAGCGCGTGATGGGCAAG GCCAGCTTCATCACCATCCAGGACCTCTCCGGCCGCATCCAGCTGTACGTGCAGCGCGACGGCGTCGGCGAAGACGTCTA TGCCGACTTCAAGCACTGGGACATCGGCGACATCGTGGGCTGCGTCGGCACGCTGTTCAAGACCAAGACCGGCGAACTCA CGGTCAAGGCGAGCGAAATCCGCCTGCTCACCAAGAGCCTGCGCCCGCTGCCGGACAAGTTCCACGGCCTCACCGACGTC GAGCAGAAGTACCGCCAGCGCTACCTCGACCTGATCATGAGCGAGCAGACCCGCTTCACCTTCGTGGCCCGCAGCCGCAT GGTGCAGTCGATCCGCAACTACATGATCAACCACGGCTTCCTCGAAGTCGAAACGCCGATGATGCACCCCATCCCCGGCG GCGCCGCGGCCAAGCCCTTCGTCACCCACCACAACGCGCTCGACATGGAACTCTTCCTGCGCATCGCGCCGGAGCTGTAC CTCAAGCGCCTGGTGGTCGGCGGGCTGGAGAAGGTGTTCGAGGTGAACCGCAACTTCCGCAACGAAGGCCTCTCGCCGCG CCACAACCCCGAATTCACGATGATGGAGTTCTATGAGGCCTACGCGGACTACCGCAGCCTGATGAACTTCACCGAAGGCC TCATCCGCCAGGCCGCACGCGAAGCGCTCGGCGCCGAAAGCTTCGTCTACCAGGGCCGCGAACTCGATCTCTCCAAGCCC TTCCACCGCCTCACCATCGTGCAGGCCATCCGCAAGTACCACCCGGGCTTCTCCGAAGCCCAGCTGGCCGACGCGGAATG GGTCAAGGAAAAGATCCAGGCCTTCGGCGAGAAGGTGAAGCCGGGCGGCCTCGGCAGCCTGCAGCTGCAACTCTTCGAAG CCTGCGCCGAAGCCGAGCTGTGGGAACCGACCTTCATCATCGACTACCCGGTTGAAGTCTCGCCGCTCGCCCGCGCCTCC GACAGCAACCCGGAAATCACCGAACGCTTCGAACTCTTCATCGTCGGCCGCGAGATCGCCAACGGCTTTTCCGAGCTCAA CGACCCCGAAGACCAGGCCGCGCGCTTCCTCGCCCAGGCCCAGGCCAAGGAAGCCGGCGACGAAGAAGCGATGTACTACG ACGCCGACTACATCCGCGCGCTCGAATTCGGCCTGCCGCCCACCGGCGGCTGCGGCATCGGCATCGACCGTCTGGTGATG CTGCTGACCGACAGCGCCTCGATCCGCGACGTGATCCTGTTCCCGCAGATGCGTCCGGAATAA Protein sequence : MSDHNATPAAQDENHIIAERREKLAQWRQAGRAFPNDFSRENTAGKLDEVYGDKEPEALEASPVEVRVAGRVMLKRVMGK ASFITIQDLSGRIQLYVQRDGVGEDVYADFKHWDIGDIVGCVGTLFKTKTGELTVKASEIRLLTKSLRPLPDKFHGLTDV EQKYRQRYLDLIMSEQTRFTFVARSRMVQSIRNYMINHGFLEVETPMMHPIPGGAAAKPFVTHHNALDMELFLRIAPELY LKRLVVGGLEKVFEVNRNFRNEGLSPRHNPEFTMMEFYEAYADYRSLMNFTEGLIRQAAREALGAESFVYQGRELDLSKP FHRLTIVQAIRKYHPGFSEAQLADAEWVKEKIQAFGEKVKPGGLGSLQLQLFEACAEAELWEPTFIIDYPVEVSPLARAS DSNPEITERFELFIVGREIANGFSELNDPEDQAARFLAQAQAKEAGDEEAMYYDADYIRALEFGLPPTGGCGIGIDRLVM LLTDSASIRDVILFPQMRPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-136 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_932991.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 3e-136 | 56 |
