Gene Information

Name : Sama_0946 (Sama_0946)
Accession : YP_926823.1
Strain : Shewanella amazonensis SB2B
Genome accession: NC_008700
Putative virulence/resistance : Virulence
Product : N-acetylglucosamine-6-phosphate deacetylase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1820
EC number : -
Position : 1145587 - 1146720 bp
Length : 1134 bp
Strand : +
Note : KEGG: son:SO3505 N-acetylglucosamine-6-phosphate deacetylase

DNA sequence : 
ATGAAAACGACCCTTATCGCCGAGCGCCTGTTTGATGGCGAGCAGTTTCACCACAATGTGCCTTTGACTGTGGAAGACGG
CCAGGTGTTGGCCCTCGATACTGTCGCCGGCTGCGCCGAGGTAAGATTGCAGGGCACCCTGGTGCCCGGTTTTATCGATG
TGCAGGTTAATGGTGGTGGCGGTGTGCTTTTTAACGACACCCCAACCGTGGCTGCCATTGAGGCCATTGGGGCGGCGCAT
GCCCGCTTTGGCACCACAGGTTATTTGCCGACGCTCATCACCGATAAGGTAGAGACCATGGCCCGGGCCGCCGATGCGGC
CGCAGAGGCTATCGCCAAAGGATCCACCGGGGTGCTCGGGGTTCACTTTGAGGGGCCGCATTTGTCGGTACCCAAAAAAG
GCGTGCATCCCGAGTCGCACATTCGCCGTATCGGCGATCGCGAACTGGAGATTTTTGCCCGTCAGGATTTGGGGCTAAAG
GTAGTGACCCTGGCGCCTGAGAATGTGTCTCCTGAGGTGATCTGCGCTCTGGTCGATGTGGGAGTCAAGGTCTGCTTGGG
CCACTCCAATGCTGATTACGCGACCACTGTCGCGGCGCTGGAAGCCGGTGCCACCGGTTTTACCCACCTTTATAACGCCA
TGTCGGCGCTCACTTCCCGAGAGCCAGGCGTTGTCGGCGCTGCCATCGACAGTGATGAAGCCTGGTGCGGTTTGATTGTT
GACGGTCACCACGTGCATTCGGCGGCGGCCCGTATTGCTATCAAGGCCAAGCCCCGCGGCAAGGTGATGTTGGTGACCGA
TGCCATGCCTCCGGTTGGCATGGATGATAACGCCAGCTTTGAACTCTTTGGTATTCAAGTGGTACGTCAGGGGGACAAGC
TTAATGCCCTGACCGGAGAGCTTGCCGGCTGCGTGTTGGACATGGCTGGTGCAGTGCAAAATACAGTCGACATGCTGGGA
CTGCCTCAGGCCGAAGCCATTCGCATGGCATCACTTTATCCTGCCGCCTTCCTTGGTATCGACAACAGGGTGGGAACCCT
GAGTGTCGGTAAGCAAGCCGATATGGTACTGCTCGATGATAACGGCCGTTGCCGCGGAACCTGGATTGGCGGTAGGCAGG
TGTTTGGCCTGTGA

Protein sequence : 
MKTTLIAERLFDGEQFHHNVPLTVEDGQVLALDTVAGCAEVRLQGTLVPGFIDVQVNGGGGVLFNDTPTVAAIEAIGAAH
ARFGTTGYLPTLITDKVETMARAADAAAEAIAKGSTGVLGVHFEGPHLSVPKKGVHPESHIRRIGDRELEIFARQDLGLK
VVTLAPENVSPEVICALVDVGVKVCLGHSNADYATTVAALEAGATGFTHLYNAMSALTSREPGVVGAAIDSDEAWCGLIV
DGHHVHSAAARIAIKAKPRGKVMLVTDAMPPVGMDDNASFELFGIQVVRQGDKLNALTGELAGCVLDMAGAVQNTVDMLG
LPQAEAIRMASLYPAAFLGIDNRVGTLSVGKQADMVLLDDNGRCRGTWIGGRQVFGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nagA ACA01848.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 3e-38 41
VC1783 NP_231418.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 6e-38 41
nagA-2 YP_001217323.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 6e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sama_0946 YP_926823.1 N-acetylglucosamine-6-phosphate deacetylase VFG1116 Protein 3e-38 41