Gene Information

Name : lspA (Sama_0925)
Accession : YP_926802.1
Strain : Shewanella amazonensis SB2B
Genome accession: NC_008700
Putative virulence/resistance : Unknown
Product : lipoprotein signal peptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : -
Position : 1119245 - 1119751 bp
Length : 507 bp
Strand : +
Note : lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis

DNA sequence :
ATGCAATTGAACTGGAAAGAAAGTGGCCTGCGCTGGTATTGGGTAGTAGTGGTGGTGTTTCTGGCCGACCAGCTGTCCAA
GCAGTGGGTACTGGCCAACTTTGACCTGTACGAGTCGGTCAAGCTGCTGCCGTTTTTTAACTTCACCTATGTGCGCAACT
ATGGCGCTGCCTTCAGCTTCCTGCATGATGCAGGGGGCTGGCAGCGCTGGCTGTTTACGGCGGTGGCTGTGGGCTTCAGC
GTGCTGTTAACCATTTGGCTGCGTAAGCAGCCAGCCAACATGGTGCGGCTGAATCTGGCCTACACCTTGGTGATTGGCGG
TGCGCTTGGTAATCTGATTGACCGTCTGCAACATGGCTTTGTGGTGGATTTCCTCGATTTTTATTGGAACACCGCCCATT
ACCCGGCGTTTAACATAGCAGATGCCGCCATCTTTATTGGTGCCGTGCTGATTATTATCGACAGCTTTAAAGCGTCCAGC
TCGGATGACAAGGCCATCAAGGAGTAA

Protein sequence :
MQLNWKESGLRWYWVVVVVFLADQLSKQWVLANFDLYESVKLLPFFNFTYVRNYGAAFSFLHDAGGWQRWLFTAVAVGFS
VLLTIWLRKQPANMVRLNLAYTLVIGGALGNLIDRLQHGFVVDFLDFYWNTAHYPAFNIADAAIFIGAVLIIIDSFKASS
SDDKAIKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lspA AAN62189.1 putative lipoprotein signal peptidase LspA Not tested PAGI-2(C) Protein 2e-17 46
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 5e-15 46
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 5e-15 46
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 7e-15 46
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 7e-15 46
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 5e-15 46
lspA ACS32043.1 lipoprotein signal peptidase Not tested AbaR5 Protein 2e-14 44
lspA CAJ77023.1 lipoprotein signal peptidase Not tested AbaR1 Protein 1e-14 44
lspA ADI24143.1 lipoprotein signal peptidase Not tested AbaR1 Protein 1e-14 42