Gene Information

Name : Sama_0810 (Sama_0810)
Accession : YP_926687.1
Strain : Shewanella amazonensis SB2B
Genome accession: NC_008700
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 994884 - 995837 bp
Length : 954 bp
Strand : +
Note : KEGG: son:SO3386 hypothetical protein

DNA sequence : 
ATGCACAAATTCAACCCTGACCGGATACAGATAGGGATCAGCGCTTGCTTGCTGGGAGAACAAGTGCGCTTTGATGGCGG
GCACAAGAACTCTGCCTACTGTCAGCAGGAGTTGAAGCCTCATTTCGATTTTGTCCCTGTCTGCCCGGAAATGGCGATTG
GCCTGGGCGCCCCTCGCAAAAGTATCCGTCAGGTTCGCATCGAGGGTGAAATCCGGGTGCGAAGTGCCGATGGCAGCATA
GATGTGACTGAGCAGCTGCAGTCTTTTTGCAATAACAAAGCCGATGGACTGGGGTTTCTCGGTGGTTATCTCTTCTGCAG
TAAGTCTCCTACCTGTGGGATGGAGCGGGTGCCTGTTTACAAGGCTGACGGCAGCGGTGGCTTTAAGGAAGGAGTGGGTG
TGTTTGCTGCGGCCCTGATGAAGCGTTTCCCCCATTTGCCTGTTGAAGAGGAAGGTCGACTGCATGACCTTGTCATAAGG
GAAAACTTTTTTACCCGGGTTTATGCCTATCACGATTGGCACTGTATGCGTTTAAAGGGGCTGACCCGAAAGGCGCTGAC
CGACTTCCACGCCCGTTACAAGTATCTGTTGTTATCCCACAGCCCGGCGATTTACCGCACCCTCGGCCCCTTGTTGGCGG
GTGATGGGGAGCTTGAGGCCGTGGCCGACTCATACTTCGATGGCTTTATGACGGCCCTGAGGCATAAGGCGAGCCGCCGT
AACCACACCAGTGCCCTGCAGCACATTCAGGGCTACTTTAAAAAGTTTCTGTCTGGCAGCCAAAAGGCAGAGCTCAGTGA
TGCCATTCTTGCCTATCGTCAGGGAGTACAACCGCTGCTGGTGCCCATTACCCTTATTCGCCATTACCTGCGGGAACATC
CAAACGACTACATCGCCGCTCAGGTGTATCTGAATCCCCACCCGGATTCGCTGCGTTTGCGATATGCTTACTGA

Protein sequence : 
MHKFNPDRIQIGISACLLGEQVRFDGGHKNSAYCQQELKPHFDFVPVCPEMAIGLGAPRKSIRQVRIEGEIRVRSADGSI
DVTEQLQSFCNNKADGLGFLGGYLFCSKSPTCGMERVPVYKADGSGGFKEGVGVFAAALMKRFPHLPVEEEGRLHDLVIR
ENFFTRVYAYHDWHCMRLKGLTRKALTDFHARYKYLLLSHSPAIYRTLGPLLAGDGELEAVADSYFDGFMTALRHKASRR
NHTSALQHIQGYFKKFLSGSQKAELSDAILAYRQGVQPLLVPITLIRHYLREHPNDYIAAQVYLNPHPDSLRLRYAY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 1e-72 47
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 1e-72 47
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 1e-72 47
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 6e-73 47
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 7e-73 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sama_0810 YP_926687.1 hypothetical protein VFG0490 Protein 4e-73 47