Gene Information

Name : Sama_0761 (Sama_0761)
Accession : YP_926638.1
Strain : Shewanella amazonensis SB2B
Genome accession: NC_008700
Putative virulence/resistance : Virulence
Product : iron-compound ABC transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 944076 - 945119 bp
Length : 1044 bp
Strand : +
Note : KEGG: son:SO1034 iron-compound ABC transporter, permease protein

DNA sequence :
GTGACCGCCCTAAAAGCCATGTTAACCCCCCTTGGTCGCCGGGAGCTGATGGTGCTGGCGCTTATTCTGGCCTGTCTGTT
ATCGCCTGTGCTGGCCAGTATTTTTGGTGCCGTGGATATCAGCTTTCGTGAGGCCATGTCGGTCTACCTGCATAGTCTCA
TTGGCGAGCGTCCCACCGATGTGGCCTACCTCGACAGCCGTATCCTGCTGGAGCTGAGGTTGCCGCGCATACTCCTGGCC
TTTGTGTGCGGCGCCGGATTGGCGCTGTCTGGCTGGGCGCTGCAACTGGTGACCCGAAATCCGCTGGCAGACCCTTATCT
TTTTGGGATCAGTGCCGGTGCCAGCCTGGGGGCAATTGTGGTACTCAGCCTTGGAATTACCCATGGGGTACTGCTCGCCA
TCGGTCTGCCGCTGGGGGCCTTTATCGGTGCTAGTGCCTCGGTATTGGTGGTGCTTACCCTCAGTGGCTTTGGGCTGCAA
AGCCAGGTTGAGCGAATGCTGCTTTCCGGGGTCGCCACCTCCTTTTTATTCGGCGCCCTTGGCAGTTTGCTTCTATATTT
TTCAAGCCCCCAGGTAACTGCGTCGGTGATATTCTGGAGTCTGGGCAGCTTTGCCCGTGCAGCATGGGATCTGCTCTGGT
TACCCTGGTTGGTGTTTGGCGGATTTGTGGCCTTTTTGCTGCTGGTCAGGCGCCAGCTTTTTGCACTCAGCGCCGGTGAT
GAAACCGCCCACGCCCTGGGCGTTTCAGTGGCTAAGCTTCGCATTATCAGTTTGCTGATGTGCTCATTGATGACCGCCGT
GCTGGTAGCCAGCTGTGGCGGCATTGGTTTTGTGGGACTGATGATCCCCCACATCGCCAGATTGCTGTTTCCGGGCAGCC
AGTCGCTGCTGATTGTGGCCATGCTGGGTGGGCTTTTTATGGTGTGGGTTGATGTGATGACCCGCAGTTTACTGCCGCCG
CAGGAGTTGCCTGTGGGGGTGATTACTGCCGTGGTTGGCAGTGTGTTTTTCCTGATGCTGCTCTTTGGCCGCAGGAGTGA
ATAA

Protein sequence :
MTALKAMLTPLGRRELMVLALILACLLSPVLASIFGAVDISFREAMSVYLHSLIGERPTDVAYLDSRILLELRLPRILLA
FVCGAGLALSGWALQLVTRNPLADPYLFGISAGASLGAIVVLSLGITHGVLLAIGLPLGAFIGASASVLVVLTLSGFGLQ
SQVERMLLSGVATSFLFGALGSLLLYFSSPQVTASVIFWSLGSFARAAWDLLWLPWLVFGGFVAFLLLVRRQLFALSAGD
ETAHALGVSVAKLRIISLLMCSLMTAVLVASCGGIGFVGLMIPHIARLLFPGSQSLLIVAMLGGLFMVWVDVMTRSLLPP
QELPVGVITAVVGSVFFLMLLFGRRSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1928 YP_005686352.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 1e-25 41
Cp1002_1913 YP_005682168.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 5e-26 41
CpC231_1907 YP_005684260.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 5e-26 41
cpfrc_01919 YP_003784319.1 hypothetical protein Not tested PiCp 7 Protein 5e-26 41