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Name : Sama_0675 (Sama_0675) Accession : YP_926553.1 Strain : Shewanella amazonensis SB2B Genome accession: NC_008700 Putative virulence/resistance : Resistance Product : AcrB/AcrD/AcrF family transporter Function : - COG functional category : V : Defense mechanisms COG ID : COG0841 EC number : - Position : 831444 - 834530 bp Length : 3087 bp Strand : + Note : KEGG: ppr:PBPRB1677 putative transporter, AcrB/D/F family DNA sequence : ATGAGCGTAGCAGGCTATTTCGTCAAAAACTCCGTCATCAGCTGGATGTTTACCCTGATCCTCTTGTTGGGAGGCAGTGT TGCCTTTCTTGGCCTTGGCCAGCTTGAAGATCCACCGTTTACCATTAAAGACGCTGTGGTGATAACCCTTTACCCCGGAG CCACATCCACCGAGGTTGAAGAAGAGGTTACGTATCCGGTAGAGAAAGCGATTCAGGCGTTGCCCTATGTGGACAAGATT AAGTCGCTCAGTACCTCCGGGTTATCGCAAATCACTGTGACCATGAAAAACACCTATGGCCCTGACCAGCTGCCGCAAAT TTGGGATGAACTCAGGCGCAAGGTCAATGATATGGCCGCGAGCCTGCCTCCCGGCGCACAGCACCCCATGGTGAACGACG ACTTTGGCGATGTGTACGGCATCATGCTGATGATCACGGGTAAAGATTTCAGCTACCGCGAGCTCAAAGACTACGTGGAC TATGTAAAGCGTGAGCTGGAGTTGGTGCCCGGTGTCGGTAAGGTCTCGTTGGCCGGTGAGCAAAAAGAACAAATTTTTGT AGAAATGTCAGTGAACAAAGCTGCCAGCTCCAACCTGGACCCCAACCTGATTGCCAACTTGCTCAATTCACAGAATATGG TGTCAGATGCAGGCAATATTCAGGTCTCTGGCGACAACCTCAAAATTCGCACCAGCGGAAGCTCTCGCTCGGTGGAGGAG TTGCAGGAACTCATTATCCCCGGCACCCAGGGCGATAAGCTTATCTATTTGAAAGATGTGGCTACCGTGCGCCGCGGTTA TCAGGAAATCCCCACCAATGTGCTCAGTTACAACCGCGAGCGTGCTATCAATCTGGGGATCTCATTTTCATCCGGCGTCA ACGTGGTGGCTGTAGGTAAGGCAGTTGATGATAAATTGGCTCAAATCGACTCGGCCCGCCCTGCGGGCATCAAAATTGAG ACCATGTATAACCAGCCGGTGGAAGTGGACAATTCTGTCGGCAGCTTTGTTTGGAATCTGATAGCCGCTGTCGTGATTGT GATAGGCGTGCTGCTGTTCTTTATGGGCGTAAAAAGCGGCATCCTGATAGGCCTTATCCTGTTTTTAACCTGTTTGGGCA CCTTTGTGTTGATGCTGCAGGCTGAGATTGAACTGCAGCGTATTTCCCTGGGAGCGCTCATTATTGCGTTAGGGATGCTG GTGGATAACGCCATTGTGGTGGTGGAAGGGATTTTGATTGGCCGCCAGCAGGGAAAAACCACCTTGGAAGCATCCGATGC CATTGTAAAGCAAACCATGTGGCCACTGCTTGGGGCTACAGTCATTGCCATCACCGCCTTTGCGCCCATTGGTTTGTCAC CGGACTCCACCGGCGAGTTTGCCGGCTCGCTGTTTTGGGTGCTGCTGTTTTCCCTTTTCCTTTCCTGGATCACCGCCATC ACCATCACGCCTTTTTTTGCCAGTCTCTTTTTTGGTGATAAAGGGGAGGAACAGCTTGAAGGTCAAACCAAAGACCCTTA TGGCGGCGCCTTCTTTACCCTTTATAAAGTCGCACTGGATGTGTGCATGCGCTATCGCTTTATCAGCGTGATTGCGGTAG TGCTGGCGTTTGTGGCGTCTGTGGTCGGGTTTGGTTACGTGAAACAATCATTTTTCCCACCCTCAACCACCCCCATATTT TTGGTGGATGTGTGGCTGCCTGAAGGGACTGATATCCGCGAAACCCAGCGGATAGTAACTGCCATGGAAGATAAGGCTGC GCAGCTGGCGGATGTGGAATTTGTGGCGTCCACCGTTGGCAAGGGATTCCCCCGATTTATGCTGACTTATGCCCCGGAAA AGAATTATGCCTCTTACGGCCAGATAGCCATTCGCACCAGCGCGTTCGAGACACTCGAAGGGGTGATGACCCAGTTCCGC CGCGAAATGGAGGCGGGCTTTCCGCAAACCCAACTCAAGTTTAAACGGCTGGAAGTGGGACCCTCCACCGATGCCAAGAT TGAGGCCCGGATCTCAGGACCGGATCCTGATGTGCTAAGAACCCTCGGGGCAGAGGTGCAGGCGGTATTTGCGGCCACAC CGGGCACAGTGAATGTGCGCCACGATTGGCGCGAACGGGTGAAATACATAGCGCCCAGGTTTAATGAAACCCAGGCCAGA CGTTTGGGCATTGTGAAAAGTGAAGTGGACAAGGCGCTCAAGTTTTCCTTTGCCGGATTGCAGATAGGGGTTTATCGCGA AGGCACTAATCTACTGTCTATCGTGGGTCGGTTGCCGGATGATGAGCGGGTCGATATCGAATCGATGGAAAGCATCCGGA TCTGGAGTCCTGTGCTGAACACACTTGTGCCTCTGCAGCAGGTAGTCGATGGATTCGAGGTGAAGTTCGAAGACCCCATC ATTCAGCGCCGGGATCGCAAGCGCACACTGACAGTCTTCGCCGATGCCGATTTTGAGTACGACCTGCTGCCTGCTGAGCT GTTTGCCAAAGTTCGACCACAGGTGGAAGCCATCAGCATGCCGCCCGGATATGAACTTGTGTGGGGAGGCGAGTTTGAGT CATCACAGGATGCCCAGGAGTCGCTGTTTGCCATTTTGCCGATGGGTTTCCTGTTTATGTTTTTGGTAACGGTATTCCTG TTTAACTCGGTGCGTAAGCCGCTGGTGATCTGGGCCTGTGTCCCGCTGGCCATTATCGGTATTACCCTGGGATTGTTGGT ACTCGATAAACCCTTCAGCTTTATGGCGTTGCTGGGGATGCTCAGTCTGTCGGGAATGCTGCTTAAGAACGGCATAGTGC TGCTTGACCAAATCAATCTGGAAATCAATGAGGGTAAGGAGCCCTTCCAGGCGGTGTTTGAGTCTACGGTTAGCCGCGTC AGGCCCGTATGTATGGCGGCTGTCACGACCATTTTGGGGATGTTGCCGCTTATCACCGATGCCTTCTTTGAGTCCATGGC GGCGGTGGTCATGTTCGGCCTTGGTGTGGCGACAGTGCTGACCTTGCTGATTGTGCCTGTGTTTTACATCATCTTTTTCA AGATACCCTATCGGGCCTACGGCGACTTTCAGAAGTCCAGCGGCTGA Protein sequence : MSVAGYFVKNSVISWMFTLILLLGGSVAFLGLGQLEDPPFTIKDAVVITLYPGATSTEVEEEVTYPVEKAIQALPYVDKI KSLSTSGLSQITVTMKNTYGPDQLPQIWDELRRKVNDMAASLPPGAQHPMVNDDFGDVYGIMLMITGKDFSYRELKDYVD YVKRELELVPGVGKVSLAGEQKEQIFVEMSVNKAASSNLDPNLIANLLNSQNMVSDAGNIQVSGDNLKIRTSGSSRSVEE LQELIIPGTQGDKLIYLKDVATVRRGYQEIPTNVLSYNRERAINLGISFSSGVNVVAVGKAVDDKLAQIDSARPAGIKIE TMYNQPVEVDNSVGSFVWNLIAAVVIVIGVLLFFMGVKSGILIGLILFLTCLGTFVLMLQAEIELQRISLGALIIALGML VDNAIVVVEGILIGRQQGKTTLEASDAIVKQTMWPLLGATVIAITAFAPIGLSPDSTGEFAGSLFWVLLFSLFLSWITAI TITPFFASLFFGDKGEEQLEGQTKDPYGGAFFTLYKVALDVCMRYRFISVIAVVLAFVASVVGFGYVKQSFFPPSTTPIF LVDVWLPEGTDIRETQRIVTAMEDKAAQLADVEFVASTVGKGFPRFMLTYAPEKNYASYGQIAIRTSAFETLEGVMTQFR REMEAGFPQTQLKFKRLEVGPSTDAKIEARISGPDPDVLRTLGAEVQAVFAATPGTVNVRHDWRERVKYIAPRFNETQAR RLGIVKSEVDKALKFSFAGLQIGVYREGTNLLSIVGRLPDDERVDIESMESIRIWSPVLNTLVPLQQVVDGFEVKFEDPI IQRRDRKRTLTVFADADFEYDLLPAELFAKVRPQVEAISMPPGYELVWGGEFESSQDAQESLFAILPMGFLFMFLVTVFL FNSVRKPLVIWACVPLAIIGITLGLLVLDKPFSFMALLGMLSLSGMLLKNGIVLLDQINLEINEGKEPFQAVFESTVSRV RPVCMAAVTTILGMLPLITDAFFESMAAVVMFGLGVATVLTLLIVPVFYIIFFKIPYRAYGDFQKSSG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1355 | YP_001217299.1 | AcrB/AcrD/AcrF family transporter | Not tested | VPI-2 | Protein | 1e-173 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sama_0675 | YP_926553.1 | AcrB/AcrD/AcrF family transporter | BAC0519 | Protein | 0.0 | 60 |
| Sama_0675 | YP_926553.1 | AcrB/AcrD/AcrF family transporter | BAC0428 | Protein | 0.0 | 59 |
| Sama_0675 | YP_926553.1 | AcrB/AcrD/AcrF family transporter | BAC0526 | Protein | 0.0 | 57 |
| Sama_0675 | YP_926553.1 | AcrB/AcrD/AcrF family transporter | BAC0425 | Protein | 6e-174 | 42 |
