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Name : Sama_0532 (Sama_0532) Accession : YP_926412.1 Strain : Shewanella amazonensis SB2B Genome accession: NC_008700 Putative virulence/resistance : Unknown Product : putative methyl-accepting chemotaxis sensory transducer Function : - COG functional category : N : Cell motility COG ID : COG0840 EC number : - Position : 655435 - 657006 bp Length : 1572 bp Strand : + Note : KEGG: son:SO3404 methyl-accepting chemotaxis protein DNA sequence : ATGCGCAACAACCAACCCGTCACCCTCAGGGAAGTGGAGCTCGACAACGAGGCCATCATTCTGTCAACCACGGATCTGAA AGGGCGTATCAAGTACGTCAATCAGGACTTCTGCAATATTGCCGGTTTCCGGGAAGAGGAACTGGTGCATGAGCCGCACA ATCTCATCCGCCACCCCGATATGCCACCCGCTGCATTCAAGATGCTCTGGAGTCGCATTCGCGAAGGGCGCCCCTGGATG GGGTTGGTGAAAAACCGCTGCAAGAACGGGGACTATTACTGGGTCGATGCGTATGTCACCCCCGTGTATGAAGATGGCGA AGTCCACGAATACCAGTCGGTGCGCCGCAAGGTGAACGCCAAGCACCGGGAGCGCGCCGAGTCCTTGTATGCCGAGTTGG TGAAAGATCCTCAGCCCGCAATACTCAGAGATAGTCGCTTTGGTGTGTGTGGCAAACTCATGCTGTGGATGGCCCTGATG CTGGGAGTATCGGCCGTTGCCGCACAGTGGTCTCTTTGGTTGGTGTTACTGCTGTTGCCCATTGCCCTCTTGGGTTGCCG TAGCTTATTGGCGCCGCTTCGAGAGCTTGCCAGTGAGGCTCGCAGTATTATTCAGGACCCCGTGGCCAGAGCGGTTTATA CAGGTCGGCGGGATGAAATTGGTGACCTCATGCTGGCCATGCGCTTTATGACCAATGAAACCGGCGGTGTGATGGGGCGG ATGGCAGATTCCACCGAGACCATGGCGAACCAAAGCAATGATCTGCTTGATGCCATCGCCCGCAGCGCCGAACGGGCCGA CGGTCAGCGTCAGCAAACCCAGCAGGCCGCCGCTGCGGTGGAAGAACTGCACGTGAGTTTTGCCGAAGTCAAAGAACATA CACTGGCCGTGGTCAGCGATGTGGAACAATGCCAAAGTGCCATGGGGCTTGGGCAACAGCAGCTGGCGGAGGTCGAACTG GCCATGCAGCAGCTACAGCACCAAATGAGTCTGTGCGATGCCGTTGTGCGTGAGATTGCCAGCGACAGCCAGGCCATCAA TCAGGTGCTTGAAGTCATTGGCACCATAGCTGAGCAAACCAATCTGCTCGCCCTCAATGCGGCAATCGAGGCGGCCCGTG CCGGTGAGTCCGGACGTGGTTTTGCCGTGGTGGCCGATGAAGTGCGGCAGCTTTCAGGACGTACCGGTGAGTCAACCGGA CAGATAGAAGGCATAGTGCGTAAATTCCAGTCCAGTACGGCGAGGGCCGAAGCCAATCTGGACAACAGTCAGCAGCAGCT TAAGACATTGGCAGCAAGACTTGGACAGGTTCAGCAGGCCTTTGGCGCGCTGGAAGGCGCCATCAATACCATCAAATCTC TTTCCGACCACAGTGCCCATGCCATGACAGAGCAGTCCAGTGCCGCAGGCAGTATCAGTGACTCGCTGCAAACCATCAAT GAACTTGCAGAAGCCGTGCTCAACCAATCCCGGGAGGCCGAGCAGTTGGGTGCCCGTATGTCACGCCTTTCAAGTAAAAC CAGTGGCTTATCCAAGCAGTTTTGGCAAAAAAGTGTGAGCGGCCGAGACTAG Protein sequence : MRNNQPVTLREVELDNEAIILSTTDLKGRIKYVNQDFCNIAGFREEELVHEPHNLIRHPDMPPAAFKMLWSRIREGRPWM GLVKNRCKNGDYYWVDAYVTPVYEDGEVHEYQSVRRKVNAKHRERAESLYAELVKDPQPAILRDSRFGVCGKLMLWMALM LGVSAVAAQWSLWLVLLLLPIALLGCRSLLAPLRELASEARSIIQDPVARAVYTGRRDEIGDLMLAMRFMTNETGGVMGR MADSTETMANQSNDLLDAIARSAERADGQRQQTQQAAAAVEELHVSFAEVKEHTLAVVSDVEQCQSAMGLGQQQLAEVEL AMQQLQHQMSLCDAVVREIASDSQAINQVLEVIGTIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRQLSGRTGESTG QIEGIVRKFQSSTARAEANLDNSQQQLKTLAARLGQVQQAFGALEGAINTIKSLSDHSAHAMTEQSSAAGSISDSLQTIN ELAEAVLNQSREAEQLGARMSRLSSKTSGLSKQFWQKSVSGRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0512 | NP_230163.1 | methyl-accepting chemotaxis protein | Not tested | VSP-2 | Protein | 2e-68 | 41 |
