Gene Information

Name : Sama_0493 (Sama_0493)
Accession : YP_926373.1
Strain : Shewanella amazonensis SB2B
Genome accession: NC_008700
Putative virulence/resistance : Resistance
Product : transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0640
EC number : -
Position : 606322 - 606675 bp
Length : 354 bp
Strand : +
Note : KEGG: hch:HCH_04651 predicted transcriptional regulator

DNA sequence :
ATGCCAGAGGAGGCGGCGATGGACGTAGTGAGCTTTTTCAAAGCGCTGGCCGATGATACCCGGCTTAGAATCCTTATGCT
GATTGTGGGGGAAACCGAGCTTTGTGTCTGTGAGCTGACGGAGGCGCTTAATCTCAGTCAGCCCAAGATCTCACGCCATT
TACGTCTTTTAAAAGACGCAGGCTTGCTGACAGACAGGCGTCAGGGGCAGTGGGTGTACTACCGCCAGGCCGAGGACTTG
CCACTGTGGTGTGCCGGGCAACTGGCACATTTGGCACAGAAAGGACCAGACTGGCTGGCCGATGAAAAACAACGCTTGAC
GACCATGGGTTGCAGACCCGGACGCTGCTGTTAA

Protein sequence :
MPEEAAMDVVSFFKALADDTRLRILMLIVGETELCVCELTEALNLSQPKISRHLRLLKDAGLLTDRRQGQWVYYRQAEDL
PLWCAGQLAHLAQKGPDWLADEKQRLTTMGCRPGRCC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsR AFC76435.1 ArsR Not tested AbaR5 Protein 4e-24 58
arsR CAJ77018.1 arsenite inducible repressor Not tested AbaR1 Protein 2e-24 58
SH0114 YP_252029.1 hypothetical protein Not tested SCCmec Protein 2e-10 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sama_0493 YP_926373.1 transcriptional regulator BAC0588 Protein 4e-17 47