Gene Information

Name : Sama_0475 (Sama_0475)
Accession : YP_926355.1
Strain : Shewanella amazonensis SB2B
Genome accession: NC_008700
Putative virulence/resistance : Unknown
Product : putative oxidoreductase
Function : -
COG functional category : R : General function prediction only
COG ID : COG2130
EC number : -
Position : 585205 - 586251 bp
Length : 1047 bp
Strand : -
Note : KEGG: vpa:VPA1416 putative oxidoreductase

DNA sequence :
ATGACTGATTCCATCAACCGCCGTATCGTGTTGGCTTCACGCCCTGTTGGCGCCCCCACCAGCGATAACTTCCGCCTGGA
AACCCTGGCCAAACCCGAACCCAAGCAGGGTGAAGTGCTGCTTCGCACCATCTACCTGTCGCTTGACCCATACATGCGTG
GCCGTATGAGCGATGCCAAGTCGTACGCCGAGCCCGTAGCCCTGGGTGAAGTGATGATTGGCGGCACCGTCTGCCAGGTG
GAAGTGTCCAACCATCCTGACTTTGCCGTGGGTGAGTGGGTACTCGCCTACAACGTGGGCTGGCAAAGCTATGCCGTGTC
CGGCGCCGAAGGTCTGCTTAAGTTGGGCGCCAACCCAAGCCATCCCTCCTATGCGCTTGGCGTGATGGGTATGCCCGGCT
TTACCGCTTACATGGGCCTGCTGGACATTGGCGCGCCCAAAGCCGGTGAAACCATAGTGGTGGCCGCTGCCACAGGGCCT
GTGGGCGCTACCGTGGGCCAGATTGGCAAGCTCAAGGGCGCGCGGGTGGTAGGCATTGCCGGCGGCGCCGACAAGTGTCG
CCATGCCGTTGAAGTGCTTGGCTTTGATGCCTGTATCGACCACAAGTCAGCCAACTTTGCTGCCGAGCTGGCCGCCGCCT
GCCCCGATGGCATCGACGTGTACTTTGAGAATGTGGGCGGGGCCGTGTTCGATGCAGTTATACCACTCTTGAATACCAAT
GCCCGCATTCCAGTGTGCGGCCTGATTTCCCAGTACAACGCCACCGAGCTGCCTGCCGGACCAGACAGACTTTCGCTGCT
GATGGGGCTGATTTTGACCAAGCGCATCAAGGTGCAGGGCTTTATCATTTTTGATGATTACGGCCACCGTTACGGTGAGT
TTGAACAGGACATGAGCCAGTGGCTGGCCGAGGGTAAAATCCAGTACCGCGAGCAAATTGAGCAGGGTCTGGAAAACGCC
CCCGAGCAGCTGATTGGTCTCCTCGAGGGCAAGAACTTCGGCAAACTGGTTATCCAGGTGAATCAGCCTCTCTCAATGTT
TGCCTGA

Protein sequence :
MTDSINRRIVLASRPVGAPTSDNFRLETLAKPEPKQGEVLLRTIYLSLDPYMRGRMSDAKSYAEPVALGEVMIGGTVCQV
EVSNHPDFAVGEWVLAYNVGWQSYAVSGAEGLLKLGANPSHPSYALGVMGMPGFTAYMGLLDIGAPKAGETIVVAAATGP
VGATVGQIGKLKGARVVGIAGGADKCRHAVEVLGFDACIDHKSANFAAELAAACPDGIDVYFENVGGAVFDAVIPLLNTN
ARIPVCGLISQYNATELPAGPDRLSLLMGLILTKRIKVQGFIIFDDYGHRYGEFEQDMSQWLAEGKIQYREQIEQGLENA
PEQLIGLLEGKNFGKLVIQVNQPLSMFA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0097 YP_252012.1 hypothetical protein Not tested SCCmec Protein 3e-61 45