Gene Information

Name : Sama_3508 (Sama_3508)
Accession : YP_929380.1
Strain : Shewanella amazonensis SB2B
Genome accession: NC_008700
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 4141835 - 4144171 bp
Length : 2337 bp
Strand : -
Note : KEGG: son:SO4629 hypothetical protein

DNA sequence :
ATGACATCGAATATTGCGCGGATCATTGCCGATGAACTGAATGTCCGTGAGGCGCAGGTCACTGCCACCATCGCCCTGCT
GGATGACGGTGCCACGGTTCCCTTTGTGGCCCGCTATCGTAAAGAAGTGACAGGGGGGCTGGATGACACCCAACTGCGTA
CTCTGCACAGCCGTCTTGGTTATTTGCGTGAGCTGAATGACCGCAGGGACGTGATCCTCTCCTCCATCGACGCTCAGGGC
AAACTGACTCCCGAACTCAAGGCCGCTATTCTGGGTGCTGACAGCAAGACCCGTCTTGAAGATCTCTATTTGCCCTATAA
ACCCAAGCGCCGCACCAAGGGACAGATTGCCATCGAAGCCGGAATCGAACCGCTGGCGAACCTCTTGCTGCAGCAGCGGC
CTGCAAACCCCGAGGCCGAAGCCGCTGCCTTTATCAATACCGAGGCCGGTTTTGCCGATACCCGTGCCGTGCTAGACGGT
GCCCGTTACATTCTGATGGAACGCTTTGCCGAAGATGCCGAGCTGATCCGCAAGGTGCGTGAACACCTGTCTGGAGTGGC
CGTGCTGCAAAGCAAGGTGATTGAAGGCAAAGAAAAAGAAGGGGCTAAGTTTCGCGATTACTTTGAACACAGCGAGCTGC
TGGCCAAAGTTCCTTCCCACAGGGCGCTGGCCATGTTGCGTGGCCGCAATGAGGGCATTCTCAGCCTGAGCATGGTTGCC
GACCCGGACTCAGAACCCGGCAGCGGCAGTTATTGTGAGGTCATTATCGCCAACCATCTGGGCTTGACCCTGGGCGACAG
TGAGGCCGATAAGTGGCTCAAGACAGTGGTTACCGGTACCTGGCGTATCAAGGTGGCGCTGCAGATGGAAACCGAGTTTA
TTTCCCGTTTGCGTGAACAGGCCGAGGACGACGCCATCAAGGTCTTTGCCCGTAATCTGCACGATCTGCTGATGGCGGCG
CCAGCCGGTTCCAAGGCGACCATGGGGCTGGACCCGGGGCTGAGAACCGGCGTGAAGGTGGCCGTGGTGAACGACACAGG
CAAACTGGTGGCTCACAGCACCATTTTCCCTCACGAGCCACAAAATCAATGGGATAAGTCGCTGAGAACCCTGGCTAACC
TGGTGAGTATGCACAAGGTGGAGCTGATTGCCGTGGGCAATGGCACCGCCTCCCGCGAAACCGACAAGCTGGCGGCTGAA
TTGATTGCGGCGGTCAAAGAACATCACCCAACGCTCACCAAGGTCATGGTAAGTGAGGCGGGCGCATCTGTTTATTCGGC
GTCTGAGCTGGCGGCCAATGAATTTCCGGATTTGGATGTGTCCATCCGCGGCGCCGTGTCCATCGCCCGTCGCTTGCAGG
ACCCGCTGGCGGAGTTGGTCAAGATTGAGCCCAAGTCCATTGGCGTGGGTCAGTATCAACACGATGTGAGCCAGAGCCAA
CTGTCCCAGTCGCTGGAAGCCGTGGTTGAAGACTGCGTAAACAGTGTGGGTGTGGACGTTAACATGGCGTCTGTTCCCCT
GCTCAGCCAGGTGTCTGGCCTCAACAAGACGCTGGCCAAAAATCTGGTGGACTACCGCGACGAGCACGGCCAGTTCAAGA
GCCGAAAAGAGCTGCTCAAGGTGCCTCGACTCGGGCCCAAAGCCTTTGAGCAGGCCGCCGGCTTTTTGCGTATCCGCGAG
GGTGATAACCCCCTCGATGCGTCGGCAGTGCACCCCGAAGCCTATTCACTGGTGGAAACCATCGCTCAAACCCGTGAAGT
GCCGCTGGCTAATCTCATCGGCAATACCGAGCTTATCCGTACCTTGAAGGCAGGGGATTTTGTCACAGACGCCTTTGGTT
TACCCACGGTGACGGATATTCTCAAGGAATTGGACAAACCCGGTCGCGACCCCCGAGGCGAGTTTAAAACGGCGCACTTT
AAAGAGGGCGTGACTGAAGTTCGTGACCTGAAGCCGGAGATGATCCTCGAAGGCGTGGTGACCAACGTGACCAATTTCGG
TGCCTTTGTGGATGTGGGCGTGCATCAGGACGGTCTGGTACACATATCTTCCTTGTCGGACAAGTTTGTCAGCGACCCCC
ATACCGTGGTGAAGGCCGGTGATGTGGTGAAGGTGAAAGTGATGGAAGTGGACGTCGAGCGTAAGCGTATCGGCCTGTCG
ATGCGGCTCGATGAAAAACCTCAGCCAGCTCAGGCCGCTAAGGGCAAGGGGGCGCCTGCCGCCAGAACAGCCCAGGCCAA
GGGTGGCAAGCCCCAGTCCAAACCCCAGAAGCCTCAGGCTATCAATGCGGCCATGGGCAATGCGTTTGCAGATGCTTTCG
CCAAAATGAAGAAATAA

Protein sequence :
MTSNIARIIADELNVREAQVTATIALLDDGATVPFVARYRKEVTGGLDDTQLRTLHSRLGYLRELNDRRDVILSSIDAQG
KLTPELKAAILGADSKTRLEDLYLPYKPKRRTKGQIAIEAGIEPLANLLLQQRPANPEAEAAAFINTEAGFADTRAVLDG
ARYILMERFAEDAELIRKVREHLSGVAVLQSKVIEGKEKEGAKFRDYFEHSELLAKVPSHRALAMLRGRNEGILSLSMVA
DPDSEPGSGSYCEVIIANHLGLTLGDSEADKWLKTVVTGTWRIKVALQMETEFISRLREQAEDDAIKVFARNLHDLLMAA
PAGSKATMGLDPGLRTGVKVAVVNDTGKLVAHSTIFPHEPQNQWDKSLRTLANLVSMHKVELIAVGNGTASRETDKLAAE
LIAAVKEHHPTLTKVMVSEAGASVYSASELAANEFPDLDVSIRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVSQSQ
LSQSLEAVVEDCVNSVGVDVNMASVPLLSQVSGLNKTLAKNLVDYRDEHGQFKSRKELLKVPRLGPKAFEQAAGFLRIRE
GDNPLDASAVHPEAYSLVETIAQTREVPLANLIGNTELIRTLKAGDFVTDAFGLPTVTDILKELDKPGRDPRGEFKTAHF
KEGVTEVRDLKPEMILEGVVTNVTNFGAFVDVGVHQDGLVHISSLSDKFVSDPHTVVKAGDVVKVKVMEVDVERKRIGLS
MRLDEKPQPAQAAKGKGAPAARTAQAKGGKPQSKPQKPQAINAAMGNAFADAFAKMKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 63