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Name : radC (Sama_0327) Accession : YP_926208.1 Strain : Shewanella amazonensis SB2B Genome accession: NC_008700 Putative virulence/resistance : Virulence Product : DNA repair protein RadC Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2003 EC number : - Position : 394468 - 395145 bp Length : 678 bp Strand : + Note : Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase DNA sequence : ATGGCAATTCGGGACTGGCCTGAGGGAGAGGGGCCACGTGAAAAATTATTGCAGCGGGGCGCGGCTCATTTATCGGACGC AGAATTACTGGCAGTGCTGCTGCGAAATGGGGTTAGTGGTCAAAATGCGGTTGACCTGGCGAGGGAACTTATCGGTGAAT TTGGTGGATTACGGCCTTTATTCAGTGCAACTAAGCAGCAGGTGTGTCGACTCCAGGGCCTGGGTCCGGTAAAATACGCC CAGCTTCAGGCTTCTGCTGAGCTTGCCAGGCGACTGGCGGGTGAATCTTTGCAGCGGGGCGCTGTGCTGACAAGTCCGGA TTTGACCCGGGATTACCTGAGATTTCAGTTGGCAGACAGAGCCTATGAGGTATTTGCCGTCTTGCTGCTCGACAGCCAAC ACAGGGTCATCCAGTTTGTCGAATTGTTTCGAGGCACCATAGATGCAGCATCGGTATATCCCCGGGAGCTGGTGTCACTG GTGTTGGAAAAGCGGGCGGCAGCGGTCATCGTCTGCCATAACCATCCGTCTGGGGTCGCTGAACCCAGCCAAGCCGACAG ACGGATCACTGAAAGATTGAAAAATGCCTTGGCAACCATAGATGTATCCTTACTGGATCACATGGTTGTAGGGGACCGGG AGATAGTCTCCTTTGCCGAGCGAGGGTGGATTGGATGA Protein sequence : MAIRDWPEGEGPREKLLQRGAAHLSDAELLAVLLRNGVSGQNAVDLARELIGEFGGLRPLFSATKQQVCRLQGLGPVKYA QLQASAELARRLAGESLQRGAVLTSPDLTRDYLRFQLADRAYEVFAVLLLDSQHRVIQFVELFRGTIDAASVYPRELVSL VLEKRAAAVIVCHNHPSGVAEPSQADRRITERLKNALATIDVSLLDHMVVGDREIVSFAERGWIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD42098.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 2e-17 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| radC | YP_926208.1 | DNA repair protein RadC | VFG1617 | Protein | 1e-17 | 41 |
