Gene Information

Name : Sama_3326 (Sama_3326)
Accession : YP_929198.1
Strain : Shewanella amazonensis SB2B
Genome accession: NC_008700
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3953446 - 3953835 bp
Length : 390 bp
Strand : +
Note : KEGG: vpa:VPA0976 hypothetical protein

DNA sequence :
ATGTCAGAGTCCTTCAGCTTGAGCGGTAATCTGGGACGGGAATTTGCCACCATTTGTGCCATGGTCGCCATCTATTGCCG
GGACCATCATGGCGGCAAAACACCCTGTACCGAGTGTCAGGCCTTTATGGAATACGCCAAGACCCGGCTGGACCGCTGCC
CCTACGGCCAGGAAAAACCCACCTGCAACAAGTGCCCAGTGCATTGCTACAAGCCAGAGCCCCGGGAGCTGGCGCGCCAA
ATCATGCGTTATGCTGGCCCCAGAATGTTACTGCCCCACCCTATCATGGCGATACGGCACCTGTTGCTGGAGCGTAAACC
CGCCCCCGAAAAGCCACCCAAAAATCTTTCAAACCGACATTTGCGGTTACAAAAAGCCGCATCAGAATAA

Protein sequence :
MSESFSLSGNLGREFATICAMVAIYCRDHHGGKTPCTECQAFMEYAKTRLDRCPYGQEKPTCNKCPVHCYKPEPRELARQ
IMRYAGPRMLLPHPIMAIRHLLLERKPAPEKPPKNLSNRHLRLQKAASE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ygbA NP_461781.1 hypothetical protein Not tested SPI-1 Protein 4e-21 46
STY2982 NP_457254.1 conserved hypothetical protein Not tested SPI-1 Protein 6e-21 45
ygbA NP_806463.1 hypothetical protein Not tested SPI-1 Protein 6e-21 45
ygbA YP_217780.1 hypothetical protein Not tested SPI-1 Protein 3e-20 44