Gene Information

Name : Sama_3176 (Sama_3176)
Accession : YP_929048.1
Strain : Shewanella amazonensis SB2B
Genome accession: NC_008700
Putative virulence/resistance : Virulence
Product : polysulfide reductase subunit B
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0437
EC number : -
Position : 3764525 - 3765091 bp
Length : 567 bp
Strand : -
Note : KEGG: son:SO4061 polysulfide reductase, subunit B

DNA sequence : 
ATGAGCAAAAGATACGTAATGGTGCACGACGAGAACAAGTGCATCGGCTGTCAGGCCTGTAGCGTGGCTTGCCGCAGCAT
TAATCAGGTACCCGATGGCGTAAGCCGCTTGCAGGTGCGCATCGAAGGCCCCTTTGGTGAGGCGCCCCATTTGCACTTCA
AGTACAACCGGGTGTCGTGCCAGCAGTGTGAGGATGCGCCCTGCGTCAAGGTGTGTCCGACCGGCGCCGCTTACGTTGGT
GACGATGGCATTGTGTCCATCAAGGCCGAGAAGTGCGTGGGCTGCATGTACTGCGTGGCCGCCTGCCCCTACAAGGTGCG
CTTTATGAACCCTGAAACCAGGGTGGCGGACAAGTGCAACTTCTGTAAGGAAACCCGTCTTGCCCGGGGTGAACAGCCCG
CCTGTGTCACTGTATGCCCAACAGATGCGCTCTGTTTCGGTGATGCAGCTGACCCTGCCAGCGAGGTGTCCAAACTGCTT
GCCACCAAGGTGAGTTATCAGGACAAGACACATCTTGGCACCAAACCCAGGCTGTACCGTATTCCAGCCAAGCGTGGAGG
TATCTGA

Protein sequence : 
MSKRYVMVHDENKCIGCQACSVACRSINQVPDGVSRLQVRIEGPFGEAPHLHFKYNRVSCQQCEDAPCVKVCPTGAAYVG
DDGIVSIKAEKCVGCMYCVAACPYKVRFMNPETRVADKCNFCKETRLARGEQPACVTVCPTDALCFGDAADPASEVSKLL
ATKVSYQDKTHLGTKPRLYRIPAKRGGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 1e-28 42
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 1e-28 42
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 9e-29 42
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 6e-29 42
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 9e-29 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sama_3176 YP_929048.1 polysulfide reductase subunit B VFG0486 Protein 3e-29 42