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Name : Sama_3083 (Sama_3083) Accession : YP_928955.1 Strain : Shewanella amazonensis SB2B Genome accession: NC_008700 Putative virulence/resistance : Virulence Product : arabinose-5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 3660047 - 3661024 bp Length : 978 bp Strand : + Note : KEGG: son:SO3956 carbohydrate isomerase, KpsF/GutQ family DNA sequence : ATGGTAGACAGAAAACAACTGCGCCAATGGGGCAGCAAGGTTATCGATATCGAAAAAGCTGCACTGGACAACCTGTACCA GTTTGTCGACAGTGATGCCTTTGCCGACGCCTGCGAGCTTATCCTGCGCTGCACTGGCAAGGTTATCGTGATGGGTATGG GTAAATCCGGCCACATTGGCAACAAGATTTCCGCTACTCTGGCAAGCACAGGTACGCCGGCGTTTTTTGTTCATCCGGGG GAAGCGAGCCACGGTGATTTGGGCGTGCTCAGTGACAACGACATAGTGCTGGCCATCTCCAACTCCGGTGAGTCCAGTGA GATCCTCACCCTGATGCCAGTGATTAAACGCCGTGGTATTCCTATCATCTCCATGACTGGCAAGCCTGAGTCCACCATGG CCAAGCATTCCCTTTTGCACCTGTGTATCAAGGTGCCGGAAGAAGCCTGTCCCCTGGGGCTTGCCCCGACCTCATCCACC ACAGCAACCCTGGTGATGGGTGATGCCCTGGCGGTCGCGCTGCTGCAGGCCAAAGGCTTTACCAAGGACGACTTTGCCAT GTCACATCCCGGTGGTGCCCTGGGCCGCAAGTTACTGCTGCACGTCAGTGATGTCATGCATAAAGGAGACGAGCTGCCAC TGGTACAGGATGATATCTGCATTACCGATGCCCTCTATGAAATCTCCAAGAAAGGCTTGGGAATGACGGCTATTGTGAAC GCTTCTGGTGCCCTGGAAGGCATCTTTACCGACGGTGACCTGCGCCGGGTGATTGATGCGCAAATTAACCTGCGTCAAAC CAGTATTGCCGATGTGATGACCCGCAACTGCATTACCATTGGTGAGCACATACTGGCTGCCGAAGCACTTAAACTGATGG ACGAAAAAAATATCAACGGCCTGATTGTGATTGACGCCGAGCGACGCCCAATCGGCGCGCTCAACATGCTGGATATGGTT AAAGCAGGGGTGATCTGA Protein sequence : MVDRKQLRQWGSKVIDIEKAALDNLYQFVDSDAFADACELILRCTGKVIVMGMGKSGHIGNKISATLASTGTPAFFVHPG EASHGDLGVLSDNDIVLAISNSGESSEILTLMPVIKRRGIPIISMTGKPESTMAKHSLLHLCIKVPEEACPLGLAPTSST TATLVMGDALAVALLQAKGFTKDDFAMSHPGGALGRKLLLHVSDVMHKGDELPLVQDDICITDALYEISKKGLGMTAIVN ASGALEGIFTDGDLRRVIDAQINLRQTSIADVMTRNCITIGEHILAAEALKLMDEKNINGLIVIDAERRPIGALNMLDMV KAGVI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 6e-55 | 44 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 3e-55 | 44 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 1e-54 | 44 |
