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Name : Sama_3058 (Sama_3058) Accession : YP_928930.1 Strain : Shewanella amazonensis SB2B Genome accession: NC_008700 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 3633749 - 3635155 bp Length : 1407 bp Strand : - Note : KEGG: son:SO3917 replicative DNA helicase DNA sequence : ATGTCACAGGAAGCCGCCTTTAAACCAAAGGGCAAGTTAAAAGATGCCCAGGTTGAAGCCATCAAAATGCCGCCGCATTC GATAGAGGCCGAGCAATCGGTGCTTGGCGGCCTGATGTTGGATGCTGAGGCTTGGGACAAAGTGGCCGAAGCCGTGGTTC GTGAAGACTTTTATTCCCGCTCTCACCGATTGATTTTCTCTGCCATGCAAAAGCTGGTGGAGCAGGGCCAGCCCCTGGAT TTGATTACTGTGTCGGAACAGCTCGAACTGAATAACGAGCTGGACGATGCCGGCGGTTTTGCCTATTTAGGTGAGATTGC CAAAAACACTCCCAGCGCCGGTAACATATTGTCTTACGCCGAAATTGTACGTGAGCGCGCCGTGGTGCGGGAAATGATTC GGGTTGCCCATGAGATTGCCGACGCGGGTTACAACCCCGAAGGTCGTGACTCCAGTGCCTTGTTGGATCTGGCGGAAACC AAGGTGTTCAAGATTGCCGAGCAGCGGGCCAATGCCAACGAAGGGCCCGAAGATATCAAGGCAATCCTCGAAAAAACCGT CGATAAAATCGAGCAGCTTTATAACAACCCCCACAATGGCGTGACCGGGGTATCCAGCGGCTTTTCGGATCTCGACCGTA TGACCGCAGGTTTTCAAAGCGGTGACCTTGTGATTGTGGCGGCACGTCCGTCCATGGGGAAAACCACCTTCGCCATGAAT CTCTGCGAATACGCCGCCATGAACGAAGACAAACCGGTACTGATTTTCAGTCTCGAGATGCCCTCAGAACAGATCATGAT GCGTATGCTGGCGTCCCTTGGCCGCGTTGATCAAACCAAGGTACGTACCGGTCAGCTGGATGATGAGGATTGGGCGCGGG TGTCTTCCACCATGGGGTTGATGCTCGAGCAGGGCAAGATGTACATCGATGACAGTTCTGGCCTGACCCCAACCGAGGTA CGCAGCCGCGCCCGCAGGGTGGCCCGTGAATGGGGTGGTCTGTCGATGATCATGGTGGACTACCTGCAGCTGATGCAGGT ACCGGCGCTGGCCGATAACCGTACCCTGGAAATTGCCGAAATTTCCCGCTCGCTCAAGGCACTTGCCAAAGAACTGGAAA TCCCTGTGATTGCCCTGTCACAGCTTAACCGCTCGCTGGAACAAAGGGCCGACAAACGCCCTGTGAACTCGGATCTGCGT GAATCCGGCTCTATCGAGCAGGATGCGGACCTTATCATGTTTATCTACCGGGACGAGGTATACAATAACGATTCCCAGGA TAAAGGCACGGCCGAAATCATTATCGGTAAGCAGCGTAACGGCCCCATTGGCCGGGTGCGTCTGACCTTTCAGGGGCAAT TCTCCCGCTTTGACAATTATGCCGGCCCTCAGTTTGAAGAAGACTGA Protein sequence : MSQEAAFKPKGKLKDAQVEAIKMPPHSIEAEQSVLGGLMLDAEAWDKVAEAVVREDFYSRSHRLIFSAMQKLVEQGQPLD LITVSEQLELNNELDDAGGFAYLGEIAKNTPSAGNILSYAEIVRERAVVREMIRVAHEIADAGYNPEGRDSSALLDLAET KVFKIAEQRANANEGPEDIKAILEKTVDKIEQLYNNPHNGVTGVSSGFSDLDRMTAGFQSGDLVIVAARPSMGKTTFAMN LCEYAAMNEDKPVLIFSLEMPSEQIMMRMLASLGRVDQTKVRTGQLDDEDWARVSSTMGLMLEQGKMYIDDSSGLTPTEV RSRARRVAREWGGLSMIMVDYLQLMQVPALADNRTLEIAEISRSLKALAKELEIPVIALSQLNRSLEQRADKRPVNSDLR ESGSIEQDADLIMFIYRDEVYNNDSQDKGTAEIIIGKQRNGPIGRVRLTFQGQFSRFDNYAGPQFEED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 3e-96 | 51 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 4e-98 | 50 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 2e-96 | 50 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 6e-96 | 50 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 6e-86 | 47 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 5e-97 | 47 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-87 | 47 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-87 | 47 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 8e-79 | 45 |
