Gene Information

Name : alr (Sama_3057)
Accession : YP_928929.1
Strain : Shewanella amazonensis SB2B
Genome accession: NC_008700
Putative virulence/resistance : Unknown
Product : alanine racemase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0787
EC number : -
Position : 3632624 - 3633718 bp
Length : 1095 bp
Strand : -
Note : converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer

DNA sequence : 
TTGAAACCTTTTCCCCGCGCAGAAATCAGCAGTCGCGCGCTGAAGGCCAACCTTAAAAGGCTGCGCCAAATTGCCCCGGG
CAGCAAGGTCATGGCCGTGGTGAAAGCCAACGGTTACGGTCATGGGCTGCTCAATGTGGCCGAGGTGCTAACCGATGCCC
ATTCAAATGCTGACGCAGATGGCTTCGGACTGGCAAGGCTTGAGGAAGCTCTGGAGGTCAGGGCCGGTGGTGTGTCTGCC
AGACTCTTATTACTGGAAGGCTTTTTCCGCAGTGAAGATTTGCCCCTGTTGGTGGAGCATGACATAGATACGGTCGTTCA
CCATGTCTCCCAGCTGGACATGCTGGAGTCGGTCAGTCTGTCTAAGCCGGTCACCGTGTGGCTAAAAATTGATTCCGGTA
TGCATCGGCTGGGGTTTCATGCCAGTGAGTTCAAGGACGTTTACCAGAGGCTTCAGCAAAACCCCAATGTGGCAAAACCC
GTGCATCTGATGACCCATTTCAGCTGCGCCGATGAGCCTCAAAAAGACTTTACCGCTACACAGATGGCCCATTTCAACGC
TCTGACCCAGGGGTTACCCGGGGACAGAACCCTGGCAAACTCCGCAGGGGTGCTGTACTGGCCACAAAGCCAGGCCGATT
GGATTCGTCCGGGTATCGCGCTTTACGGAGTTTCTCCAGTGGCGGGTGACCTTGGCAGCAACCACGGTCTTGAACCTGCG
ATGGAGTTGGTCTCGCAATTGATTGCCGTGCGGGAGCACAGCGCCGGGGAGAGTGTGGGTTATGGCGCATACTGGACGGC
CAGTCGTGATACTCGCCTCGGTGTTGTGGCCATAGGTTATGGTGACGGATACCCCCGCAATGCCCCCGAGGGCACGCCAG
TGCTGGTTAATGGCAGACGGGTACCCATTGTTGGTCGGGTCTCCATGGATATGCTGACGGTGGATCTGGGGCCTGACGCC
GCAGATAAAGTGGGTGACAGGGCACTTCTCTGGGGCAAGGAATTGCCCGTGGAAGAAGTGGCTGAACGAATTGGCACCAT
TGCCTATGAGCTGGTGACCAAGTTAACCCCGCGAGTGGCAGTTTGCCTCGATTAA

Protein sequence : 
MKPFPRAEISSRALKANLKRLRQIAPGSKVMAVVKANGYGHGLLNVAEVLTDAHSNADADGFGLARLEEALEVRAGGVSA
RLLLLEGFFRSEDLPLLVEHDIDTVVHHVSQLDMLESVSLSKPVTVWLKIDSGMHRLGFHASEFKDVYQRLQQNPNVAKP
VHLMTHFSCADEPQKDFTATQMAHFNALTQGLPGDRTLANSAGVLYWPQSQADWIRPGIALYGVSPVAGDLGSNHGLEPA
MELVSQLIAVREHSAGESVGYGAYWTASRDTRLGVVAIGYGDGYPRNAPEGTPVLVNGRRVPIVGRVSMDMLTVDLGPDA
ADKVGDRALLWGKELPVEEVAERIGTIAYELVTKLTPRVAVCLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dadX AAC61705.1 alanine racemase Not tested PAI I CFT073 Protein 2e-63 44