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Name : Sama_2759 (Sama_2759) Accession : YP_928631.1 Strain : Shewanella amazonensis SB2B Genome accession: NC_008700 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 3298852 - 3300843 bp Length : 1992 bp Strand : - Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGTCTCGTAAAGAACTCGCCAACGCTATCCGCGCACTCAGCATGGACGCCGTTCAAAAGGCCAACTCCGGTCACCCCGG TGCCCCCATGGGGATGGCAGATATTGCCGAAGTCCTTTGGCGCGGTCATCTGAAGCACAACCCCACCAATCCACAGTGGG CCGATCGCGACCGTTTCATCCTCTCCAATGGCCACGGCTCCATGCTGCACTATTCGCTGCTGCACCTGGCCGGTTATGAC CTGTCTATTGAAGACCTCAAGCAGTTCCGTCAGTTGCACTCACGCACCCCAGGTCACCCTGAGTACGGTTATGCCCCCGG TATCGAAACCACCACAGGCCCTCTGGGTCAGGGCATCACCAACGGCGTGGGTATGGCCATTGCTGAGAAAGTGCTGGCTG CCCAGTTTAACCGTGACGGTCACGACATCGTTGACCACTACACCTACGTGTTCATGGGCGATGGCTGCTTGATGGAAGGT ATTTCCCACGAGGCTTGCTCTTTGGCAGGTACCCTGGGTCTGGGCAAACTGATTGCTTTCTGGGATGACAACGGCATCTC TATCGACGGTCACGTTGAAGGCTGGTTTACCGACGACACGCCAAAGCGTTTCGAATCTTACGGCTGGCATGTAATTGCCG GTGTTGACGGCCACGATGCCGACGCCATCGACGCGGCCATCAAGGCGGCCAAGGCCGACCCACGTCCAACCCTGATTTGC TGCAAAACCATCATTGGTTACGGCTCGCCAAACAAGTCCGGTTCACACGACTGCCACGGCGCGCCGCTGGGCGATGCTGA AATCGCTGCCGCCCGTGAATTCCTCGGCTGGAAACACGACCCATTCGTTATTCCTGCTGATATTTATGCCCAGTGGGATG CCAAAGAAGCCGGTATTGCCTCTGAGAAAGCCTGGGACGAAAAGTTTGCCGCCTACGCCGCTGCTTACCCAGAGCTGGCT GCTGAATACCAGCGCCGCGTGAAGGGTGAACTGCCTGCCAACTTCGCTACCGAAGCCCAGGCCTACATCGAGAAGCTGCA GAACAACCCTGCCAACATCGCTTCCCGTAAAGCCTCGCAAAATGCTCTGGAAGCCTTCGGCGCCATGCTGCCTGAATTCC TCGGCGGCAGTGCTGACCTGGCCCCATCCAACCTGACCATGTACTCGGCTTCCAAATCCATCACAGGTGCTGATGCCAGT GGTAACTACCTGCACTATGGTGTGCGCGAGTTCGGTATGACCGCCATCATCAACGGTATCGCGCTGCACGGCGGCTTTGT GCCATACGGCGCCACCTTCCTGATGTTTATGGAATATGCCCGTAACGCCATGCGTATGGCTGCCCTGATGAAGGTGCAGA ACATCCAGGTTTACACCCACGACTCTATCGGTCTGGGTGAAGACGGCCCGACTCACCAGCCAGTAGAGCAAATCGCTTCT CTGCGCGTGACCCCGAACATGAGCACCTGGCGCCCATGTGACCAGGTGGAATCAGCCGTGGCCTGGAAATACGCCATCGA GCGCAAAGACGGCCCAACGTCGCTGATCTTCTCCCGTCAGAACCTGGCGCAAATGCCACGCAGCGCTGAGCAGCTGGCCA ATGTCGCCAAGGGCGGTTATGTGCTGGTAGACAGCGCTGCAGCCCCTGAACTCATCATCATTGCCACCGGCTCTGAAGTT GAGCTGGCAGTGAAAGCCCAGGCCGAGCTGACCGCCAAGGGCAAGCAGGTGCGCGTGGTGTCCATGCCATCTACCGACGT GTTCGACAAGCAGGATGCGGCCTATAAAGAAGCCGTACTGCCAGCCAGCGTCACAAAACGTGTGGCCGTAGAAGCGGGTA TTGCCGATTACTGGTATAAGTATGTGGGTCTGAACGGCCGCATCATCGGCATGACCAGCTTCGGCGAGTCAGCGCCAGCC AATCAGCTGTTTGAAATGTTCGGCTTCACCGTCGACAAGGTGGTTGCCGCCGCCGAAGAGCTGCTGGGTTAA Protein sequence : MSRKELANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWRGHLKHNPTNPQWADRDRFILSNGHGSMLHYSLLHLAGYD LSIEDLKQFRQLHSRTPGHPEYGYAPGIETTTGPLGQGITNGVGMAIAEKVLAAQFNRDGHDIVDHYTYVFMGDGCLMEG ISHEACSLAGTLGLGKLIAFWDDNGISIDGHVEGWFTDDTPKRFESYGWHVIAGVDGHDADAIDAAIKAAKADPRPTLIC CKTIIGYGSPNKSGSHDCHGAPLGDAEIAAAREFLGWKHDPFVIPADIYAQWDAKEAGIASEKAWDEKFAAYAAAYPELA AEYQRRVKGELPANFATEAQAYIEKLQNNPANIASRKASQNALEAFGAMLPEFLGGSADLAPSNLTMYSASKSITGADAS GNYLHYGVREFGMTAIINGIALHGGFVPYGATFLMFMEYARNAMRMAALMKVQNIQVYTHDSIGLGEDGPTHQPVEQIAS LRVTPNMSTWRPCDQVESAVAWKYAIERKDGPTSLIFSRQNLAQMPRSAEQLANVAKGGYVLVDSAAAPELIIIATGSEV ELAVKAQAELTAKGKQVRVVSMPSTDVFDKQDAAYKEAVLPASVTKRVAVEAGIADYWYKYVGLNGRIIGMTSFGESAPA NQLFEMFGFTVDKVVAAAEELLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 76 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 0.0 | 68 |
