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Name : Sama_2260 (Sama_2260) Accession : YP_928135.1 Strain : Shewanella amazonensis SB2B Genome accession: NC_008700 Putative virulence/resistance : Virulence Product : UDP-glucose/GDP-mannose dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 2723235 - 2724512 bp Length : 1278 bp Strand : - Note : KEGG: pcr:Pcryo_0613 UDP-glucose/GDP-mannose dehydrogenase DNA sequence : ATGATGTCGTTGAAAGAATTAAAAATAGGCGTTATTGGCTTAGGTTACGTTGGTCTCCCTTTGGCCGTTGAGTTTGGCAA AAAATATCCAACATTGGGATTTGATATTAATGAACTACGTGTAAGAGAGTTAAGTCAGGGGAGAGATGCGACACTTGAAT GTACTGCAGAAGAATTGTCAGAAGCGAGTCTATTAAAGTATACATCTACTTTGGAAGACATTAAAGACTGCAATTTCTAT ATAGTTACAGTGCCAACACCCATCGATGAAAGTAATGCACCAGATTTGACTCCATTAAAAAAGGCATCCGAGGCGTTAGG TAAGGTCATTTCGCTTGATGATATCGTGGTTTTTGAGTCTACAGTCTATCCAGGTGCAACAGAGGAATATTGTATTCCTA TAATTGAACGTGTTTCTAATTTGATGTTTAATCGTGATTTTTATGCTGGTTATAGCCCAGAACGAATTAATCCAGGTGAT AAGGTAAATCGTTTAACAACCATTGTGAAAATTACTTCAGGGTCCACTCCAGAAGTGGCGGACTTTGTCGATGCAGTTTA TTCATCAATTGTTAGTGCGGGAACTCATAAAGCATCTTCGATAAAAGTTGCGGAGGCTGCCAAGGTTATTGAAAACACTC AGAGAGATCTGAATATTGCAGTGATTAACGAATTTGCAAAAATATTCAACCGCTTAAAAATTGACACAGAAGAAGTTTTA AAGGCTGCTGGTACTAAATGGAATTTTTTGCACTTTAAACCAGGCTTGGTTGGTGGGCACTGCATAAGTGTAGACCCATA TTATTTAACCCATAAAGCGAAAGAGGTTGGTTATTCTCCTGAAGTGATATTGGCTGGGCGTAGAATAAACGACGGTATGG GAAGCTATGTAGCTACCCAGATGGTTAAAAAATTAGCCAGTAAAAAAATACACATAGACGAAGCTAACGTACTAATAATG GGCTTTACATTTAAAGGTGATTGTCCAGATGTACGTAATACCAAGGTTATTGAAATAGTTAAAGAACTCAAAAGTTTCAA TATTAACGTTGATGTCTATGATTCTTGGGCAAATCCAGACGAAGTAGAACATGAGTATGGTATTAAGATGATTTCTGAGC TCTTTAATGGATACTATGATGGCATTATTGTTGCGGTTGATCACTCAGAGTTTAAACAGATGGGTATTCAAAAAGTACGA CTTTTAGGTAGGCCTAATCATGTGGTGTACGATGTAAAATACGTATTTGGTTTGAATGATTCAGATATCCGTTTGTAA Protein sequence : MMSLKELKIGVIGLGYVGLPLAVEFGKKYPTLGFDINELRVRELSQGRDATLECTAEELSEASLLKYTSTLEDIKDCNFY IVTVPTPIDESNAPDLTPLKKASEALGKVISLDDIVVFESTVYPGATEEYCIPIIERVSNLMFNRDFYAGYSPERINPGD KVNRLTTIVKITSGSTPEVADFVDAVYSSIVSAGTHKASSIKVAEAAKVIENTQRDLNIAVINEFAKIFNRLKIDTEEVL KAAGTKWNFLHFKPGLVGGHCISVDPYYLTHKAKEVGYSPEVILAGRRINDGMGSYVATQMVKKLASKKIHIDEANVLIM GFTFKGDCPDVRNTKVIEIVKELKSFNINVDVYDSWANPDEVEHEYGIKMISELFNGYYDGIIVAVDHSEFKQMGIQKVR LLGRPNHVVYDVKYVFGLNDSDIRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-132 | 63 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-132 | 63 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-104 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sama_2260 | YP_928135.1 | UDP-glucose/GDP-mannose dehydrogenase | VFG0431 | Protein | 1e-132 | 63 |
