Gene Information

Name : Sama_1980 (Sama_1980)
Accession : YP_927855.1
Strain : Shewanella amazonensis SB2B
Genome accession: NC_008700
Putative virulence/resistance : Unknown
Product : 3-oxoacyl-(acyl-carrier-protein) reductase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 2408589 - 2409335 bp
Length : 747 bp
Strand : -
Note : KEGG: sdn:Sden_2293 3-oxoacyl-(acyl-carrier-protein) reductase

DNA sequence :
ATGTCTGTATCTTTGGATCTGACCGGCAAGGTAGCCCTGGTTACCGGTGCCAGCCGCGGTATCGGTAAAGCCATCGCACT
GACCCTGGCCGAAGCCGGCGCAACTGTTGTGGGTACTGCCACAAGTGAGAAAGGCGCCGCAGCCATTTCCGATTATCTGG
GTGACAAGGGTTTTGGTCTGGTACTTAACGTCACCAGCAGTGAATCCGTTGCCGAAATGTATACCGCGATCAAAGAAAAA
GCAGGAGATGTTGATATTCTGGTCAACAATGCCGGTATCACCCGCGACAACCTGCTGATGCGCATGAAAGACGAAGAGTG
GGAAGAGATAATCGACACCAACCTCACGTCTTTGTACCGCCTGTCCAAGCCGGTAATGCGCAGCATGATGAAAAAGCGTC
ATGGCCGTATCATCAGCATTGGTTCAGTGGTTGGCACCATGGGTAATGCCGGACAGGTAAACTACTCAGCTGCTAAAGCC
GGTTTGATTGGATTTACAAAATCTCTCGCCAGAGAGGTTGCATCTCGTCAAATTACGGTTAATGCTATTGCTCCTGGATT
TATCCAGACTGACATGACCGACGAGCTGACGCCTGAGCAGCAGCAAGGCATCATGTCACAGGTGCCGATGGAAAGATTAG
GGCAGGCGCAGGAAATTGCTAATGCCGTCCTGTTCTTGGCCTCGGACGCTGCCGCTTACATCACGGGTGAAACCCTGCAT
GTAAACGGCGGAATGTACATGGTTTAA

Protein sequence :
MSVSLDLTGKVALVTGASRGIGKAIALTLAEAGATVVGTATSEKGAAAISDYLGDKGFGLVLNVTSSESVAEMYTAIKEK
AGDVDILVNNAGITRDNLLMRMKDEEWEEIIDTNLTSLYRLSKPVMRSMMKKRHGRIISIGSVVGTMGNAGQVNYSAAKA
GLIGFTKSLAREVASRQITVNAIAPGFIQTDMTDELTPEQQQGIMSQVPMERLGQAQEIANAVLFLASDAAAYITGETLH
VNGGMYMV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 5e-34 42
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 3e-34 42
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 2e-34 42
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 2e-34 42
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 2e-35 42