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Name : Sama_1878 (Sama_1878) Accession : YP_927753.1 Strain : Shewanella amazonensis SB2B Genome accession: NC_008700 Putative virulence/resistance : Unknown Product : IS3 family transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 2293542 - 2294381 bp Length : 840 bp Strand : + Note : KEGG: son:SOA0129 transposase, IS3 family DNA sequence : GTGCGGCAACTGTGTCAGCTGTTTGATGTTCATCCGAGCGGGTATTACGCGTGGAGAAGTTGCGCCAAGTCGAAGCGACA ACGCGATAATGAACGACTTACAGGCCAACTCAAACAATGTTGGCTTGAGTCTGGTGGCGTCTATGGATATCGCAAACTCC ATCGAGATCTACGTGATCTTGGTGAGCAATGCGGTATTAATCGCGTATATCGCCTGATGCAGCGAGCAGGATTGCGAGCA CAAGTTGGTTATCGCAAGCCTAGAGCTCGTAGTGGTGAGCCGCATGTTGTAACGCCAAATCGTTTAGAACGGCAATTTAA CCCCTTAGCGCCAAACCAAGCGTGGGTGACGGATATTACGTACATCAAAACGCATGAAGGTTGGCTCTATCTTGGCGCAG TGATGGACTTGTTCTCACGTCACATTATTGGTTGGTCAATGGGCAGTCGAATCACCAAAGAACTTGCGTTAGATGCCTTA TTGATGGCGGTTTGGCGTCGTAAACCTGATGGAAATGTCCTGGTTCACTCAGATCAAGGAAGCCAATACACGAGCCATGA TTGGAATGAATTTCTAAGCGCTCATGGTTTGGAAGGTAGCATGAGCCGTCGGGGCAACTGCCATGATAACGCAGTAGCGG AGAGTTTCTTTCAACTGCTGAAACGTGAACGAATTAGGCGAAAAATCTATGCGACTAGGAACGAGGCAAAGATGGATGTG TTTAATTATATTGAGATGTTTTACAACCCGAAACGACAGCATAGTTCCAATGATGGGCTATCACCGTTAGAGTATGAGCG TAAGTATTTTAATGAGGCTAAAAGTCGTCTAGTGAAGTAG Protein sequence : MRQLCQLFDVHPSGYYAWRSCAKSKRQRDNERLTGQLKQCWLESGGVYGYRKLHRDLRDLGEQCGINRVYRLMQRAGLRA QVGYRKPRARSGEPHVVTPNRLERQFNPLAPNQAWVTDITYIKTHEGWLYLGAVMDLFSRHIIGWSMGSRITKELALDAL LMAVWRRKPDGNVLVHSDQGSQYTSHDWNEFLSAHGLEGSMSRRGNCHDNAVAESFFQLLKRERIRRKIYATRNEAKMDV FNYIEMFYNPKRQHSSNDGLSPLEYERKYFNEAKSRLVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpB | CAB61574.1 | transposase B | Not tested | HPI | Protein | 8e-41 | 45 |
| trp1329B | CAB46576.1 | IS1329 transposase B | Not tested | HPI | Protein | 5e-40 | 44 |
| l7094 | CAD33743.1 | ORF B protein | Not tested | PAI I 536 | Protein | 1e-31 | 43 |
| orfB | CAE85178.1 | OrfB protein, IS911 | Not tested | PAI V 536 | Protein | 1e-31 | 43 |
| hp1 | AAC61713.1 | Hp1 | Not tested | PAI I CFT073 | Protein | 9e-46 | 42 |
| unnamed | AAB86997.1 | hypothetical 31 KD protein | Not tested | SHI-1 | Protein | 9e-46 | 42 |
| unnamed | AAF09030.1 | unknown | Not tested | SHI-O | Protein | 9e-46 | 42 |
| c3575 | NP_755450.1 | transposase insF | Not tested | PAI I CFT073 | Protein | 1e-45 | 42 |
| tnpI | AAD44751.1 | TnpI | Not tested | SHI-2 | Protein | 9e-46 | 42 |
| Z1134 | NP_286669.1 | hypothetical protein | Not tested | TAI | Protein | 1e-45 | 42 |
| unnamed | AAF09022.1 | unknown | Not tested | SHI-O | Protein | 3e-46 | 42 |
| Z1573 | NP_287077.1 | hypothetical protein | Not tested | TAI | Protein | 1e-45 | 42 |
| unnamed | AAL57581.1 | transposase 1 | Not tested | LEE | Protein | 2e-40 | 42 |
| ECO111_3732 | YP_003236068.1 | putative IS3 transposase InsF | Not tested | LEE | Protein | 7e-40 | 42 |
| unnamed | AAL57519.1 | transposase 1 | Not tested | LEE | Protein | 4e-40 | 42 |
| unnamed | AAQ07468.1 | TnpI-like protein | Not tested | Not named | Protein | 7e-45 | 41 |
| insF | CAC43414.1 | transposase of insertion element IS3 | Not tested | PAI III 536 | Protein | 7e-41 | 41 |
| tnpA1133 | ACK44540.1 | TnpA | Not tested | SGI1 | Protein | 8e-41 | 41 |
| orfB | AGK07032.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 8e-41 | 41 |
| orfB | AGK07090.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 8e-41 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sama_1878 | YP_927753.1 | IS3 family transposase | VFG1484 | Protein | 6e-32 | 43 |
| Sama_1878 | YP_927753.1 | IS3 family transposase | VFG1706 | Protein | 5e-46 | 42 |
| Sama_1878 | YP_927753.1 | IS3 family transposase | VFG1631 | Protein | 4e-41 | 41 |
