Gene Information

Name : Sama_1758 (Sama_1758)
Accession : YP_927633.1
Strain : Shewanella amazonensis SB2B
Genome accession: NC_008700
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG2194
EC number : -
Position : 2150332 - 2151948 bp
Length : 1617 bp
Strand : +
Note : KEGG: son:SO2048 membrane protein, putative

DNA sequence :
TTGAAGTCCATTGGTTTGAATCGGTTCACTTTTTTTATAGCCCTGTATTACGCAGCGATCCTGAACATTCCCCTGTATAT
CAGGGCGGCAGAAGGGCTGAAGTCATTGTCACACATCGATTGGTTGTTTGTAGCAAGCTTACCTGTACTGCTGACATCCT
TACTGGCACTCATCTTCTCGCTTTTCAGTGTTAAGTACCTCGTAAAACCTTTTTTTATCCTGCTGACGTTGGTTTCGGCG
TTGGTCGTCTTTGGCATGTATAAATACGGTATCGTGTTTGACCGTGCCATGATGGAAAACATCTTTGAAACCCACAGCGC
CGAAGCGTTCATGTATCTCAATACAGAGTCCGTGGTTGGCTTTTTACTGCTTGGGATACTGCCGGCGTTTCTTATTGCCA
AAGTTAAAATTGAATATCGGGTCTGGTGGAAAGAGCTGCTGGTTAAGTCTGGCTTCATGCTGGGAATGGTATCGATTGCC
GGTGGTGTGCTTGCCGGTTACTACCAGGACTATGTCGCCTTTGGGCGAAATAATGATGATATGAAACAACTGGTTGTACC
TACCTATTACATAGGCGCGGCGGCAGGGTTCGTGAATCAGCGTTATATTGAAACGCCGTTGGAATATCAGCCCCTTGGGA
CAGATGCCAACAACCAAACCCGGGACAGCAATCAAAAACCCCTGTTAACCGTGCTGTTGGTCGGGGAAACCGCCCGTTCA
ATGAATTATCAGTATTATGGCTATCAAAAAGATACCAATGCGTTTACCAAGCCCCACAATCCCATTGTACTGAGCGCGAC
CCGGTCATGTGGTACCGCAACAGCACAATCCTTACCCTGTATGTTCTCCCGTATGGGCAGGGAAGACTACAATGCGAGAA
AAGCCAGAGCCCAGGATACCGTAATCGATGTACTCGATCATGCCGGTGTGACTGTGTATTGGATTGATAGTGACAGTGGT
TGTAAGGGTGTTTGTGATCGGGTAATCAACGAAACAGTCAAGCTGGATGAGGATCCCGCTCTGTGTGATGGCGAGTCTTG
TCTGGATCAAGTCCTTTTGAATCGTCTCGATAACATACTGGCGAGTCCCATTGAAAAAGACACCCTATTGGTGCTGCATA
TTATGGGCAGCCATGGACCTACGTACTTCCAGCGCTATCCGGACGAACATAAAGCCTTCACGCCAGATTGCCCACGCAGT
GATATTCAAAACTGCAGTAACGAGGCGCTCGTAAATACCTACGACAACACCATCCGTTACAGTGACTACATCATGGCGGA
GGTGATTAATAGACTGAAACAGCAAGAGCCAGTGGCCGATACTGCGATGATGTATATCTCAGATCATGGAGAGTCTCTGG
GCGAAAAGGGCTTGTACCTGCATGGTGCGCCCTATGCATTTGCACCCATCGAGCAAATCAGTGTGCCCTGGCTGTTGTGG
CTATCTGACGGTTTTAAAGAAGAAAACCGCCTGGATGAAAGCTGTTTAAGGAGCTTGCAGGGCGAATGGTCCCATGACAA
TCTATTTGATAGCTTGTTGGGGTGGATGAATATTCACACCAGCATATATCGCAAGGAGCTGGATATTTTCAGTCGCTGTC
GACTTCCGGCGGTATAA

Protein sequence :
MKSIGLNRFTFFIALYYAAILNIPLYIRAAEGLKSLSHIDWLFVASLPVLLTSLLALIFSLFSVKYLVKPFFILLTLVSA
LVVFGMYKYGIVFDRAMMENIFETHSAEAFMYLNTESVVGFLLLGILPAFLIAKVKIEYRVWWKELLVKSGFMLGMVSIA
GGVLAGYYQDYVAFGRNNDDMKQLVVPTYYIGAAAGFVNQRYIETPLEYQPLGTDANNQTRDSNQKPLLTVLLVGETARS
MNYQYYGYQKDTNAFTKPHNPIVLSATRSCGTATAQSLPCMFSRMGREDYNARKARAQDTVIDVLDHAGVTVYWIDSDSG
CKGVCDRVINETVKLDEDPALCDGESCLDQVLLNRLDNILASPIEKDTLLVLHIMGSHGPTYFQRYPDEHKAFTPDCPRS
DIQNCSNEALVNTYDNTIRYSDYIMAEVINRLKQQEPVADTAMMYISDHGESLGEKGLYLHGAPYAFAPIEQISVPWLLW
LSDGFKEENRLDESCLRSLQGEWSHDNLFDSLLGWMNIHTSIYRKELDIFSRCRLPAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1140 NP_286675.1 hypothetical protein Not tested TAI Protein 2e-99 46
Z1579 NP_287083.1 hypothetical protein Not tested TAI Protein 2e-99 46