Gene Information

Name : Sama_0172 (Sama_0172)
Accession : YP_926053.1
Strain : Shewanella amazonensis SB2B
Genome accession: NC_008700
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 203196 - 203627 bp
Length : 432 bp
Strand : +
Note : KEGG: son:SO0169 general secretion pathway protein G

DNA sequence : 
ATGCAAAAGCGCAAGCAACAAGGTTTTACCCTGCTGGAAATCATGGTGGTTATCGTGATCTTGGGCCTTCTGGCCGCCAT
GGTGTTGCCAAACGTGTTGGGTAACAAAGAGTCTGCCGACATCAAGAAAGCGGTAGCCGATATCGTCGCTCTGGAAAATG
CTCTGGACATGTACAAGCTGGATAACAGCGTCTACCCCACCACTGAGCAGGGGCTGGATGCTTTAGTACAAAAGCCAATC
ATGTCCCCTGAGCCGCGTAACTACCGTGACGGTGGCTATGTGAAGCGTCTGCCTCAGGATCCATGGCGCAGTGATTACAT
GCTGCTGAGCCCTGGTGAAAACGGCAAAATTGATATCTTCAGTGCCGGCCCAGATATGCAGCCAGGAACCGAGGATGATA
TCGGTAACTGGAACCTGCAAAAGTACCAATAA

Protein sequence : 
MQKRKQQGFTLLEIMVVIVILGLLAAMVLPNVLGNKESADIKKAVADIVALENALDMYKLDNSVYPTTEQGLDALVQKPI
MSPEPRNYRDGGYVKRLPQDPWRSDYMLLSPGENGKIDIFSAGPDMQPGTEDDIGNWNLQKYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 5e-41 64
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 3e-41 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sama_0172 YP_926053.1 general secretion pathway protein G VFG2050 Protein 1e-41 64
Sama_0172 YP_926053.1 general secretion pathway protein G VFG0180 Protein 4e-33 52
Sama_0172 YP_926053.1 general secretion pathway protein G VFG1871 Protein 2e-31 50