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Name : Sama_0171 (Sama_0171) Accession : YP_926052.1 Strain : Shewanella amazonensis SB2B Genome accession: NC_008700 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 201935 - 203158 bp Length : 1224 bp Strand : + Note : KEGG: son:SO0168 general secretion pathway protein F DNA sequence : ATGCCGGCTTTTGAATACAAGGCGCTCGATGGCAAGGGCAAACAGCAAAAAGGGGTGATTGAGGCAGACAGTGCCCGTCA TGCCCGCAGTCAGCTGCGCGATATGCGTCTGATGCCGCTGGAAATCGAACCTGTTGTCGAAAAGGAAACCAAGGCCAAAT CCGTTGGCTTCAGCCCCTTCAAGCGGGGGATCAGTGTGGCCGAGCTGGCATTGATCACCCGTCAGATTGCCACCCTGGTG GCCTCTGGCTTACCGGTGGAAGAAGCCCTCAAGGCAGTGGGCCAGCAGTGTGAAAAAGACCGTCTCGCTTCCATGGTGAT GGCGGTGCGCTCTCGGGTGGTGGAAGGCTATTCTCTTGCCGACTCCATGGCCGAATTCCCTCATATTTTTGATGATTTGT ATCGCTCTATGGTGGCCTCGGGTGAAAAATCCGGTCATCTGGAAGTGGTGCTCAATCGTCTGGCCGATTACACCGAGCGG CGTCAGCAGCTCAAGTCCAAACTGACCCAAGCCATGATTTACCCTGTGATGCTGACCTTGGTGGCCATTGGCGTGGTCGC CGTGTTGCTTGCGGCCGTGGTACCCAAGGTGGTGTCTCAGTTTGAACATCTGGGGCAGGAGTTGCCTGCGACCACTAAGG CCCTGATGGCATCGTCAGCCTTTGTGCAGGACTATGGCTTGTTAATTATGGTCTTGGTCGTGGTCGCCTTTGTGGTGTTT CAGCGTTTGCTCGCCAACGACAACTTCAAGATGAAGTACCATCAGTTTCTGCTGCGTCTGCCGGTGGTTGGCCGGGTCAG TCGCAGCATCAACACGGCCCGCTTTGCCCGCACCCTGAGTATTCTCAGTGCCAGTGCCGTGCCGCTGCTGGATGGGATGC GTATCGCCGGAGAGGTGATGCAGAACTTAAGGGTGCGCGAAGCGGTCGAAGAAGCAACGGCCCGAGTGCGCGAGGGGACC AGCCTGGGGGCGGCCCTGACCAACACCAAGCTGTTTCCGCCCATGATGCTCTATATGATTGCCTCGGGCGAAAAGAGCGG TCAGCTCGAAAACATGCTCGAGCGTGCTGCGGATAATCAGGACAGGGAATTTGAGGCCAATGTGAATCTGGCGCTGGGGG TATTTCAACCGGCGCTGGTGATCAGCATGGCTGCGGTGGTGCTCTTTATCGTACTCGCCATCCTGCAACCTATTCTGGAA ATGAACAATTTGATTGGTGGCTAA Protein sequence : MPAFEYKALDGKGKQQKGVIEADSARHARSQLRDMRLMPLEIEPVVEKETKAKSVGFSPFKRGISVAELALITRQIATLV ASGLPVEEALKAVGQQCEKDRLASMVMAVRSRVVEGYSLADSMAEFPHIFDDLYRSMVASGEKSGHLEVVLNRLADYTER RQQLKSKLTQAMIYPVMLTLVAIGVVAVLLAAVVPKVVSQFEHLGQELPATTKALMASSAFVQDYGLLIMVLVVVAFVVF QRLLANDNFKMKYHQFLLRLPVVGRVSRSINTARFARTLSILSASAVPLLDGMRIAGEVMQNLRVREAVEEATARVREGT SLGAALTNTKLFPPMMLYMIASGEKSGQLENMLERAADNQDREFEANVNLALGVFQPALVISMAAVVLFIVLAILQPILE MNNLIGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 2e-88 | 56 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-88 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sama_0171 | YP_926052.1 | general secretion pathway protein F | VFG2049 | Protein | 6e-85 | 56 |
| Sama_0171 | YP_926052.1 | general secretion pathway protein F | VFG0181 | Protein | 7e-83 | 50 |
| Sama_0171 | YP_926052.1 | general secretion pathway protein F | VFG1870 | Protein | 3e-73 | 45 |
