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Name : Sama_0169 (Sama_0169) Accession : YP_926050.1 Strain : Shewanella amazonensis SB2B Genome accession: NC_008700 Putative virulence/resistance : Virulence Product : type II and III secretion system protein Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 198247 - 200358 bp Length : 2112 bp Strand : + Note : KEGG: sdn:Sden_0121 type II and III secretion system protein DNA sequence : ATGAACAATCAAGGATTCCGACGCAAACTGATCGCCAGCCTGGTCGCTGGTACAGTGCTCCTTTCGCCTGCGATTGCCTG GTCTGCTTCCAACGAGCAGCTGGCGCCAAGTTTCAAAAATGCCGAAATTCAGGAATTTATTAATACTGTTGGTAAACGAC TGAACAAGACCATCATTGTCGATCCGACCATCCGCGGCAAAATCAACGTCAGAAGTTACGATAACCTCACCGAGGACCAA TACTTCCAGTTTTTCCTGAACGTGCTCCAGGTGTATGGCTATGCTGTGGTGGAAATGGAAAATGGCGTCCTTAAGGTCAT TAAAGACAAGGATGCCAAGACCTCCAACATCCGTGTAGCAGATGACAGTGCCCCGGGCTTGGGAGATGAATTGGTCACCC GCATCGTGCCCCTGTACAACTCCGAAGCCAAGCAGCTGGCACCGCTTTTGCGTCAGCTTAACGACAACGCCGGTGGCGGT AACGTGGTTAACTACGACCCGTCCAACGTACTGATGCTCACCGGCCGTGCTGCCGTGGTGAACAAGTTGGTGGAAATCGT TAAACGTGTAGATAAACAGGGCGATACCGAAGTTCTGGTCGTGCCTTTGCAGCACGCCTCCGCTTCTGAAATGGTGCGGA TTATCGATACCCTCTACCGCGCTTCCGCCAACCAGGCACAGCTGCCCGGTCAGGCCCCCAAGGTGGTGGCTGATGAGCGT ATTAACGCCGTGGTGATCAGTGGCGATGAAAAGAGTCGCCAGCGTGTAGTGGAATTGGTGAAACGTCTGGACGCCGAGCA GGCCAGCACAGGCAACACCAAGGTGCGTTACCTGCGTTATGCCAAGGCCGAAGATTTGGTTGAAGTGCTGACCGGCTTTG CCCAAAAACTGGAAGAAAGCAAAGACAACGGCGCACAGCAAGCTTCGGGCAAGCGTCGCAGCCAAATCAATATCATGGCG CACACAGACACCAATGCTCTGGTCATCAGCGCCGAGCCTGACCAGATGCGTACCCTAGAAAGCGTCATCAATCAGCTCGA TATCCGCCGTGCTCAGGTGCTGGTGGAAGCCATCATTGTGGAAGTGGCAGAAGGTGACGATGTGGGCTTTGGTGTGCAGT GGGCCACTGAGTCCGGTGGCGGCACCCAATTCAATAATCTGGGCCCTACCATTGGTGAAATTGGCGCCGGTATCTGGCAG GCCCGGGGCGAAGAAGCCTCCGAAGTGACCACCATTGACGGCAACGGTAACCCAATCGTTTCCAAGAACCCTGAAAAACG TGGTGATATCACCTTGCTGGCACAGGCGCTGGGCAAGGTGAATGGCATGGCGTGGGGTGTGGCCATGGGCGACTTTGGTG CCCTGATTCAGGCCGTGTCCTCCGATACCAACTCAAACGTGCTGGCTACGCCTTCCATCACCACTCTGGATAACCAGGAA GCTGCCTTTATCGTGGGTGATGAGGTGCCGGTACTGACAGGGGCGCAAAACTCCAGCAACGGTAACTCCAACCCCTTCCA GACGGTTGAACGTAAGGAAGTGGGTGTGAAGCTGAAAGTGACGCCACAAATCAACGAAGGCAATGCAGTGAAGCTGGCCA TTGAGCAGGAAGTGTCTGGTATCAATGGCAAGACGGGCGTAGACGTGACCTTCGCTACCCGCCGTTTGACCACCACAGTT ATGGCTGACTCCGGCCAAATCGTGGTGCTGGGTGGGTTGATCAACGAAGAGGTGCAGGAGAGCGTGCAGAAGGTGCCTAT CCTGGGCGATATTCCGCTGCTTGGCCATCTGTTCAAGTCGTCTTCCAGCGGTAAGAAAAAGAAAAACCTGATGGTGTTTA TCAAACCCACCATCATTCGTGATGGCATTACCATGGAAGGCATCGCCGGTCGCAAATACAACTATTTCCGTGCCCTGCAG CTCGAGCAACAGGAACGTGGCGTTAATCTGATGCCCAATACCAGTGTGCCCGTGCTTGAAGAGTGGGATCAGTCGCAGCA TCTGCCACCGGAAGTGAATGACATCCTTGACCGCTACAAAGAAGGCAAGGGGTTGGACACCGACATGCGTGAAAAGGACG CCGCACTGAATTACATCAACGAGAACAAGTAA Protein sequence : MNNQGFRRKLIASLVAGTVLLSPAIAWSASNEQLAPSFKNAEIQEFINTVGKRLNKTIIVDPTIRGKINVRSYDNLTEDQ YFQFFLNVLQVYGYAVVEMENGVLKVIKDKDAKTSNIRVADDSAPGLGDELVTRIVPLYNSEAKQLAPLLRQLNDNAGGG NVVNYDPSNVLMLTGRAAVVNKLVEIVKRVDKQGDTEVLVVPLQHASASEMVRIIDTLYRASANQAQLPGQAPKVVADER INAVVISGDEKSRQRVVELVKRLDAEQASTGNTKVRYLRYAKAEDLVEVLTGFAQKLEESKDNGAQQASGKRRSQINIMA HTDTNALVISAEPDQMRTLESVINQLDIRRAQVLVEAIIVEVAEGDDVGFGVQWATESGGGTQFNNLGPTIGEIGAGIWQ ARGEEASEVTTIDGNGNPIVSKNPEKRGDITLLAQALGKVNGMAWGVAMGDFGALIQAVSSDTNSNVLATPSITTLDNQE AAFIVGDEVPVLTGAQNSSNGNSNPFQTVERKEVGVKLKVTPQINEGNAVKLAIEQEVSGINGKTGVDVTFATRRLTTTV MADSGQIVVLGGLINEEVQESVQKVPILGDIPLLGHLFKSSSSGKKKKNLMVFIKPTIIRDGITMEGIAGRKYNYFRALQ LEQQERGVNLMPNTSVPVLEEWDQSQHLPPEVNDILDRYKEGKGLDTDMREKDAALNYINENK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-145 | 52 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 7e-151 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sama_0169 | YP_926050.1 | type II and III secretion system protein | VFG2047 | Protein | 6e-144 | 52 |
