Gene Information

Name : Sama_1486 (Sama_1486)
Accession : YP_927363.1
Strain : Shewanella amazonensis SB2B
Genome accession: NC_008700
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 1799184 - 1799933 bp
Length : 750 bp
Strand : +
Note : KEGG: son:SO2927 ABC transporter, ATP-binding protein

DNA sequence : 
ATGTCAAAAATGCATGCCATCAAAGTCGTCCACCTCAAGAAAAAGGTTCAAACCCAGGAAGGGGAGCTCACTATCCTGAA
AGGCGTGGATATGGAAGTCAAGCCGGGAGAAAGTGTGGCCATTATCGGGCCGTCTGGTTCGGGCAAGTCCACGCTGCTGG
GGCTGCTGGCGGCTCTGGATACACCCTCCGAAGGGGAAATCTGGCTTGACGGCAGCGCCTTGTCCAATCTTGGCGAAGAA
GCCAAAGCGGCTCTGCGAAAGAAAAAAATCAGCTTTATTTTCCAGTCGTTTATGTTGGTTGATACCTTAACTGCCCTGGA
AAACGTGATGCTGCCTGCCGAGCTTGCCGGGATGAAAGACGCCAAAGCCAAGGCTGAGGCCATGCTCGAGCGGGTTGGGC
TTTCCCACCGGGTAAATCATTTGCCCAAACAGCTTTCCGGCGGTGAGCAGCAGCGGGTGGCCATTGCCCGCGCCTTTATT
TGTGAACCCAAGGTCCTCTTTGCCGACGAACCCACAGGCAATCTTGACGGCGGCAATGCCCACAAGGTGGCCGATATGCT
GTTTGCCCTCAACGCGGAGCTTGGTACCACTCTGGTACTGGTCACCCACGACAATCAACTGGCGCTGCGCTGTCAGCGGC
AGTTCACCATGACCGAAGGTGAGCTTGCCGAGACAACCGCGGCGCAGGAAGCGCCTCGACAGGATGCACAGGCAGAGGTC
GAAACCAACATCAAGGAGGCCGCATGCTGA

Protein sequence : 
MSKMHAIKVVHLKKKVQTQEGELTILKGVDMEVKPGESVAIIGPSGSGKSTLLGLLAALDTPSEGEIWLDGSALSNLGEE
AKAALRKKKISFIFQSFMLVDTLTALENVMLPAELAGMKDAKAKAEAMLERVGLSHRVNHLPKQLSGGEQQRVAIARAFI
CEPKVLFADEPTGNLDGGNAHKVADMLFALNAELGTTLVLVTHDNQLALRCQRQFTMTEGELAETTAAQEAPRQDAQAEV
ETNIKEAAC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-24 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-25 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-25 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-25 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sama_1486 YP_927363.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-31 48
Sama_1486 YP_927363.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-33 44