Gene Information

Name : Sama_1384 (Sama_1384)
Accession : YP_927261.1
Strain : Shewanella amazonensis SB2B
Genome accession: NC_008700
Putative virulence/resistance : Resistance
Product : streptogramin A acetyl transferase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : -
Position : 1676123 - 1676803 bp
Length : 681 bp
Strand : -
Note : KEGG: eca:ECA3190 streptogramin A acetyl transferase

DNA sequence : 
ATGACAAAACTCCCCCATACCACCGCCCATACCCAAGCGAAAACACAACCCGGCCCCAGCCCCGATAATCCATTCCCCAT
GGAAGGCTTCCCGCAGGTGTGCTTTATCAAAAACACCATCAGCAATCCCAACATTCAGGTGGGCGATTACAGCTATTACG
ACGACCCAGAGGACAGTGCCAACTTTGAGCACAACGTGCTGTATCACTTCCCCTTTATTGGCGACAAGCTGATTATCGGT
AAATTCTGCGCCATCGCCCGCGGGGTCAGGTTCATCATGAATGGTGCCAACCATCCCATGGCTGGCGTGAGCACCTATCC
GTTTTTTATTTTTGGCAACGGCTGGGAGCAAGCGGCGCCTGAGCCGGGGGAATTACCCTATAAAGGCGATACCGAAATCG
GCAACGATGTGTGGATAGGCTATGAGGCCCTGATTATGCCCGGGGTAAAGGTGGGCAATGGCGCCATTATCGCCAGCCGC
GCTGTGGTCACCACTGACGTACCTGCCTACGCCATCGTTGGTGGCAACCCAGCCAAGGTGATGAAAATGCGCTTTGATGA
GAAAGACATCGCCCTGCTTGAAGCCATCGCCTGGTGGGATTGGCCGGTAGCGAAAATTACCGCCCACCTGCTCGATATCA
AAAGTGGTAATCTTGAAGCCCTGAAGCAGGCACAACCGTAA

Protein sequence : 
MTKLPHTTAHTQAKTQPGPSPDNPFPMEGFPQVCFIKNTISNPNIQVGDYSYYDDPEDSANFEHNVLYHFPFIGDKLIIG
KFCAIARGVRFIMNGANHPMAGVSTYPFFIFGNGWEQAAPEPGELPYKGDTEIGNDVWIGYEALIMPGVKVGNGAIIASR
AVVTTDVPAYAIVGGNPAKVMKMRFDEKDIALLEAIAWWDWPVAKITAHLLDIKSGNLEALKQAQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 1e-30 46
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 1e-30 44
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 1e-30 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sama_1384 YP_927261.1 streptogramin A acetyl transferase AM180355.1.gene2499. Protein 1e-46 50
Sama_1384 YP_927261.1 streptogramin A acetyl transferase NC_002516.2.878374.p Protein 4e-29 47
Sama_1384 YP_927261.1 streptogramin A acetyl transferase AY123251.gene2.p01 Protein 6e-31 46
Sama_1384 YP_927261.1 streptogramin A acetyl transferase AY740681.1.gene5.p01 Protein 7e-31 44
Sama_1384 YP_927261.1 streptogramin A acetyl transferase AF322577.2.gene4.p01 Protein 7e-31 44
Sama_1384 YP_927261.1 streptogramin A acetyl transferase JF268688.1.gene6.p01 Protein 1e-28 44