Name : Sama_1355 (Sama_1355) Accession : YP_927232.1 Strain : Shewanella amazonensis SB2B Genome accession: NC_008700 Putative virulence/resistance : Unknown Product : phage integrase family site specific recombinase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 1643758 - 1644714 bp Length : 957 bp Strand : + Note : KEGG: son:SO2037 site-specific recombinase, phage integrase family DNA sequence : ATGACACACAGTCCCTTCCTGAATGCTGTCCGCGACAGTATACGTTTGAGAGGCTACAGCTTGCGCACGGAGAAAACTTA CCTTCATTGGATTAAGTTTTACATTCTTTTCAATCAAAAACGCCATCCTGACACTATGGGCAGCGCGGAAATTACCGCGT TTTTAACCTATCTTGCTGTAGAGCGCCATGTGGCCGCGAATACCCAAAAAGTGGCCTTAAATGCGTTGATCTATCTGTAT CAAAAGTTTTTACAGATTGAGCTTGGCGAGTTGCCTTTTTCATTGGCCACCAAGCAGCGTTCTTTGCCCATCGTCGTCAC ACAGACAGAGGTCGCACATATCCTCGCTAAACTGAGTGGGGTTCACTTACATGTGATTCAAATGCTCTACGGCAGTGGGC TCAGAGTGACAGAATGTCTCAGGCTTAGGGTGCAGGATGTCGACTTGGAGCGGTTATCTGTGACCGTGCATGACGGTAAA GGGAATAAGGACCGCCAAACGTTGCTCAGCCGAAGTTGCCTGAATTGGTTACCGGATCAAATTGAACATAGTCTGAATAT CCAGCAAAAAGACAATCAACGTGGTATTGGACCATCGATGCCTACAGCACTTTCGGTAAAGTACCCGAATGCCTTTCGCG AACCTGGCTGGATGTATTTGTTTCCGAGTAGTGGATTATGCCCTCATCCTATCACCGGTGAAATTTGCCGCCATCATCTT CACGACAGTGCGATTCGCAAAGCGTTGAGAATCGCGGTGCGTCATGCTGGGGTGCGCAAAAAGGTGAATTGCCATACTTT CCGTCATTCCTTCGCTACTCACTTGCTGCAGGCCGGATACGATATCCGTACTGTGCAGGAGTTATTGGGCCATAACGATG TAAAGACAACCCAGATTTACACCCACGTACTGGGCCAGCATTACGCCGGAACAGTCAGCCCCCTTGATCGGTTGTGA Protein sequence : MTHSPFLNAVRDSIRLRGYSLRTEKTYLHWIKFYILFNQKRHPDTMGSAEITAFLTYLAVERHVAANTQKVALNALIYLY QKFLQIELGELPFSLATKQRSLPIVVTQTEVAHILAKLSGVHLHVIQMLYGSGLRVTECLRLRVQDVDLERLSVTVHDGK GNKDRQTLLSRSCLNWLPDQIEHSLNIQQKDNQRGIGPSMPTALSVKYPNAFREPGWMYLFPSSGLCPHPITGEICRHHL HDSAIRKALRIAVRHAGVRKKVNCHTFRHSFATHLLQAGYDIRTVQELLGHNDVKTTQIYTHVLGQHYAGTVSPLDRL |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
intI1 | ABB48427.1 | IntI1 integrase | Not tested | SGI1 | Protein | 6e-59 | 45 |
intI1 | AAK02045.1 | integrase | Not tested | SGI1 | Protein | 1e-58 | 45 |
intI1 | AGK36642.1 | IntI1 integrase | Not tested | AbaR26 | Protein | 6e-59 | 45 |
intI1 | ABZ01842.1 | IntI1 | Not tested | SGI2 | Protein | 1e-58 | 45 |
unnamed | AAL08437.1 | Tn21 integrase IntI1 | Not tested | SRL | Protein | 6e-59 | 45 |
intI | CAJ77082.1 | Integrase | Not tested | AbaR1 | Protein | 6e-59 | 45 |
intI | CAJ77028.1 | Integrase | Not tested | AbaR1 | Protein | 1e-58 | 45 |
intI | YP_001844881.1 | integrase | Not tested | AbaR20 | Protein | 8e-59 | 45 |
unnamed | ACF06155.1 | class 1 integrase | Not tested | Tn5036-like | Protein | 2e-59 | 45 |
intI1 | AGF35060.1 | IntI1 integrase | Not tested | SGI1 | Protein | 6e-59 | 45 |
intI1 | ACY75520.1 | integrase | Not tested | Tn6060 | Protein | 1e-58 | 45 |
intI1 | YP_005797130.1 | integrase | Not tested | AbaR4e | Protein | 8e-59 | 45 |
intI1 | AGK07098.1 | IntI1 integrase | Not tested | SGI1 | Protein | 2e-59 | 45 |
intI1 | AGK06930.1 | IntI1 integrase | Not tested | SGI1 | Protein | 6e-59 | 45 |
intI1 | ACY75535.1 | integrase | Not tested | Tn6060 | Protein | 1e-58 | 45 |
intI1 | YP_005797145.1 | integrase | Not tested | AbaR4e | Protein | 8e-59 | 45 |
intI1 | AGK06967.1 | IntI1 integrase | Not tested | SGI1 | Protein | 6e-59 | 45 |
intI1 | AGF34986.1 | IntI1 integrase | Not tested | SGI1 | Protein | 1e-58 | 45 |
intI1 | ACN81019.1 | IntI1 integrase | Not tested | AbaR5 | Protein | 8e-59 | 45 |
intI1 | AGK07013.1 | IntI1 integrase | Not tested | SGI1 | Protein | 6e-59 | 45 |
intI1 | AGF35026.1 | IntI1 integrase | Not tested | SGI1 | Protein | 1e-58 | 45 |
EC042_4092 | YP_006098375.1 | integrase | Not tested | Tn2411 | Protein | 3e-59 | 45 |
intI1 | AGK07071.1 | IntI1 integrase | Not tested | SGI1 | Protein | 6e-59 | 45 |
intI1 | CAB46685.1 | DNA integrase | Not tested | Not named | Protein | 1e-58 | 45 |
intI1 | AFV53119.1 | IntI1 integrase | Not tested | AbGRI2-1 | Protein | 6e-59 | 45 |
intI1 | AFL65913.1 | class 1 integrase | Not tested | SGI1-J6 | Protein | 2e-41 | 44 |
int1 | YP_005160012.1 | integrase | Not tested | Not named | Protein | 3e-47 | 44 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Sama_1355 | YP_927232.1 | phage integrase family site specific recombinase | VFG1028 | Protein | 3e-59 | 45 |